RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 NIPAL2Q9H841 368 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 CMC2Q9NRP2 79 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 AURKAIP1Q9NWT8 199 aaPredicted RBP12.98□□□□□ -0.33
VCX3A-201ENST00000381089 USE1Q9NZ43 259 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 PITPNC1Q9UKF7 332 aa12.98□□□□□ -0.33
VCX3A-201ENST00000381089 SAC3D1A6NKF1 404 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 ZNF732B4DXR9 585 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 CHST1O43916 411 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 RHBDL1O75783 438 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 BAG2O95816 211 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 COX7A1P24310 79 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 MAP2K3P46734 347 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 MICAQ29983 383 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 SMIM21Q3B7S5 101 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 CEACAM21Q3KPI0 293 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 ZNF770Q6IQ21 691 aaPredicted RBP12.97□□□□□ -0.33
VCX3A-201ENST00000381089 TEX47Q8TBZ9 253 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 GIPC3Q8TF64 312 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 THEM6Q8WUY1 208 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 PHF21AQ96BD5 680 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 FOXRED1Q96CU9 486 aaPredicted RBP12.97□□□□□ -0.33
VCX3A-201ENST00000381089 AJUBAQ96IF1 538 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 MMP28Q9H239 520 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 C19orf12Q9NSK7 152 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 ZNF222Q9UK12 451 aa12.97□□□□□ -0.33
VCX3A-201ENST00000381089 OR5B21A6NL26 309 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 VGLL3A8MV65 326 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 H0YHG0 523 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 ALDOBP05062 364 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 CD28P10747 220 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 PSMA6P60900 246 aaKnown RBP12.96□□□□□ -0.33
VCX3A-201ENST00000381089 RCN1Q15293 331 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 CNN3Q15417 329 aaKnown RBP12.96□□□□□ -0.33
VCX3A-201ENST00000381089 ZNF561Q8N587 486 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 OTOSQ8NHW6 89 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 RPS4Y2Q8TD47 263 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 AMELYQ99218 206 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 DGCR6LQ9BY27 220 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 PRSS22Q9GZN4 317 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 OR51V1Q9H2C8 321 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 OR51I2Q9H344 312 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 MED20Q9H944 212 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 ZNF702PQ9H963 129 aa12.96□□□□□ -0.33
VCX3A-201ENST00000381089 FAM183AA6NL82 134 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 H3BUI4 141 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 CD33P20138 364 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 PRKACGP22612 351 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 PAX6P26367 422 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 CEP78Q5JTW2 689 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 VAX1Q5SQQ9 334 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 ZBTB37Q5TC79 503 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 HAGHLQ6PII5 290 aaPredicted RBP12.95□□□□□ -0.34
VCX3A-201ENST00000381089 COMMD2Q86X83 199 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 Q8N2B8 174 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 PQLC1Q8N2U9 271 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 OR8B12Q8NGG6 310 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 OR5A2Q8NGI9 324 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 OR2T27Q8NH04 317 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 PIFOQ8TCI5 191 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 CENPNQ96H22 339 aaPredicted RBP12.95□□□□□ -0.34
VCX3A-201ENST00000381089 LYZL4Q96KX0 146 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 FGF23Q9GZV9 251 aaPredicted RBP12.95□□□□□ -0.34
VCX3A-201ENST00000381089 SERTAD4Q9NUC0 356 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 TCF19Q9Y242 345 aa12.95□□□□□ -0.34
VCX3A-201ENST00000381089 TBL2Q9Y4P3 447 aaKnown RBP12.95□□□□□ -0.34
VCX3A-201ENST00000381089 RFPL4AA6NLU0 287 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 RFPL4AL1F8VTS6 287 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 H3BN98 237 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 MTRF1O75570 445 aaKnown RBP12.94□□□□□ -0.34
VCX3A-201ENST00000381089 ATP6V1B1P15313 513 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 GK3PQ14409 553 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 HABP2Q14520 560 aaPredicted RBP12.94□□□□□ -0.34
VCX3A-201ENST00000381089 PLA1AQ53H76 456 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 TMEM200BQ69YZ2 307 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 ACP7Q6ZNF0 438 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 KRT77Q7Z794 578 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 CALHM1Q8IU99 346 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 OR13D1Q8NGV5 346 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 AQP3Q92482 292 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 FEVQ99581 238 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 CITED2Q99967 270 aaPredicted RBP12.94□□□□□ -0.34
VCX3A-201ENST00000381089 OAZ3Q9UMX2 235 aa12.94□□□□□ -0.34
VCX3A-201ENST00000381089 A0A0U1RQV5 110 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 ACOD1A6NK06 481 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 PRR23D1E9PI22 279 aaPredicted RBP12.93□□□□□ -0.34
VCX3A-201ENST00000381089 G3V2T6 193 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 ARG1P05089 322 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 PRR23D2P0DMB1 279 aaPredicted RBP12.93□□□□□ -0.34
VCX3A-201ENST00000381089 PRDX2P32119 198 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 RIPPLY1Q0D2K3 151 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 FOXB2Q5VYV0 432 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 PLCXD3Q63HM9 321 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 MOB3CQ70IA8 216 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 KRT74Q7RTS7 529 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 POC1AQ8NBT0 407 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 OR4M1Q8NGD0 313 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 MALSU1Q96EH3 234 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 NIPSNAP1Q9BPW8 284 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 LAMP5Q9UJQ1 280 aa12.93□□□□□ -0.34
VCX3A-201ENST00000381089 POLDIP2Q9Y2S7 368 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms