RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 FAM74A3Q4VXF1 159 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 CFAP161Q6P656 301 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 SUMF1Q8NBK3 374 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 TNFAIP8L1Q8WVP5 186 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 PP6455Q8WZ26 134 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 MRGPRFQ96AM1 343 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 REEP6Q96HR9 211 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 NARS2Q96I59 477 aaKnown RBP12.95□□□□□ -0.34
PRNP-201ENST00000379440 OR2A7Q96R45 310 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 OR2H1Q9GZK4 316 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 ALX4Q9H161 411 aaPredicted RBP12.95□□□□□ -0.34
PRNP-201ENST00000379440 UPB1Q9UBR1 384 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 TIMM10BQ9Y5J6 103 aa12.95□□□□□ -0.34
PRNP-201ENST00000379440 ZNF407Q9C0G0 2248 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 OR6C6A6NF89 314 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 DISC1C4P0D8 188 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 ZNHIT1O43257 154 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 MRPL33O75394 65 aaKnown RBP12.94□□□□□ -0.34
PRNP-201ENST00000379440 PMP2P02689 132 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 SERPINA2P20848 420 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 TAS2R60P59551 318 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 TMEM95Q3KNT9 176 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 RIPPLY2Q5TAB7 128 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 DCAF12L2Q5VW00 463 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 Q6ZSR3 168 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 TUSC5Q8IXB3 177 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 SEMA6DQ8NFY4 1073 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 FNDC9Q8TBE3 224 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 CALHM2Q9HA72 323 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 SLC7A10Q9NS82 523 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 VSIG4Q9Y279 399 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 ASPMQ8IZT6 3477 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 SP1P08047 785 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 HIST1H1DP16402 221 aaKnown RBP12.94□□□□□ -0.34
PRNP-201ENST00000379440 ZNF708P17019 499 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 MEOX1P50221 254 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 RPP30P78346 268 aaKnown RBP12.94□□□□□ -0.34
PRNP-201ENST00000379440 OR51T1Q8NGJ9 327 aa12.94□□□□□ -0.34
PRNP-201ENST00000379440 NUDT16L1Q9BRJ7 211 aaKnown RBP12.94□□□□□ -0.34
PRNP-201ENST00000379440 ELL3Q9HB65 397 aaPredicted RBP12.94□□□□□ -0.34
PRNP-201ENST00000379440 LGALS8O00214 317 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 SLC31A2O15432 143 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 GALR2O43603 387 aaPredicted RBP12.93□□□□□ -0.34
PRNP-201ENST00000379440 ZNF35P13682 527 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 RAB4BP61018 213 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 MEF2DQ14814 521 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 AARDQ4LEZ3 155 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 RGS7BPQ6MZT1 257 aaPredicted RBP12.93□□□□□ -0.34
PRNP-201ENST00000379440 HAS2Q92819 552 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 FER1L6-AS2Q96M78 137 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 DNTTIP1Q9H147 329 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 PARD6AQ9NPB6 346 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 DNAJC13O75165 2243 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 ATG12O94817 140 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 UBBP0CG47 229 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 MGMTP16455 207 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 FOXG1P55316 489 aaPredicted RBP12.93□□□□□ -0.34
PRNP-201ENST00000379440 RAP2BP61225 183 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 RPS27AP62979 156 aaKnown RBP12.93□□□□□ -0.34
PRNP-201ENST00000379440 DEFB124Q8NES8 71 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 TMEM45BQ96B21 275 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 SSX3Q99909 188 aa12.93□□□□□ -0.34
PRNP-201ENST00000379440 VRK1Q99986 396 aaPredicted RBP12.93□□□□□ -0.34
PRNP-201ENST00000379440 URM1Q9BTM9 101 aaKnown RBP12.93□□□□□ -0.34
PRNP-201ENST00000379440 IGKV3D-15A0A087WSY6 115 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 A0A096LPE4 126 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 A0A1W2PPZ6 126 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 MDS2Q8NDY4 140 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 OR56B1Q8NGI3 324 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 CCDC107Q8WV48 283 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 CST11Q9H112 138 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 FGF2P09038 288 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 GSTP1P09211 210 aaKnown RBP12.92□□□□□ -0.34
PRNP-201ENST00000379440 TMEM11P17152 192 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 MTCP1P56278 107 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 KRTAP27-1Q3LI81 207 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 CYB5R2Q6BCY4 276 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.92□□□□□ -0.34
PRNP-201ENST00000379440 CPEB3Q8NE35 698 aaKnown RBP12.92□□□□□ -0.34
PRNP-201ENST00000379440 OR4K15Q8NH41 348 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 IP6K3Q96PC2 410 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 S100A13Q99584 98 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 PRRT1Q99946 306 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 OPN4Q9UHM6 478 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 LIPGQ9Y5X9 500 aa12.92□□□□□ -0.34
PRNP-201ENST00000379440 SPAARA0A1B0GVQ0 90 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 FAM230AA0A1W2PPH8 454 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 OR2AT4A6NND4 320 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 MFNGO00587 321 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 SYNGR4O95473 234 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
PRNP-201ENST00000379440 ALDH3B1P43353 468 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 PPIAP62937 165 aaKnown RBP12.91□□□□□ -0.34
PRNP-201ENST00000379440 ARF1P84077 181 aaKnown RBP12.91□□□□□ -0.34
PRNP-201ENST00000379440 DHRS2Q13268 280 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 C11orf88Q6PI97 169 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 FAM89BQ8N5H3 189 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 BVESQ8NE79 360 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 C10orf35Q96D05 121 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms