RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 AMBNQ9NP70 447 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 SIRT7Q9NRC8 400 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 OR14J1Q9UGF5 321 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 PCDHGB1Q9Y5G3 927 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ANK2Q01484 3957 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 PQLC2LA1A4F0 135 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 DHRS7CA6NNS2 312 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 SIGLEC5O15389 551 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 SLC16A6O15403 523 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 DBTP11182 482 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 PSG2P11465 335 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 MMP9P14780 707 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 AMY2BP19961 511 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 PRTN3P24158 256 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 KIR3DL2P43630 455 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 TGM4P49221 684 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ACTA2P62736 377 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ACTG2P63267 376 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 PRB3Q04118 309 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 PDCD1Q15116 288 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 DEFB112Q30KQ8 113 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 CDONQ4KMG0 1287 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 SLC25A30Q5SVS4 291 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ATPAF1Q5TC12 328 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 TMEM42Q69YG0 159 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ACP7Q6ZNF0 438 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF788Q6ZQV5 615 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 KRT74Q7RTS7 529 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 LHFPL3Q86UP9 236 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 FAM185AQ8N0U4 392 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ACBD7Q8N6N7 88 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 POC1AQ8NBT0 407 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNRF1Q8ND25 227 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 OR2G2Q8NGZ5 317 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 SLC25A28Q96A46 364 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 BORCS8Q96FH0 119 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 C4orf36Q96KX1 117 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 MYCBPQ99417 103 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ALG8Q9BVK2 526 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 SIRPDQ9H106 197 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 FAM118AQ9NWS6 357 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 SMPD3Q9NY59 655 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 IGKV1D-17A0A075B6S4 117 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 CENPVL3A0A0U1RRI6 287 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 A0A1W2PRD5 423 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 A0A1W2PRF3 423 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 A0A1W2PRM7 423 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 RFPL4AA6NLU0 287 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 RFPL4AL1F8VTS6 287 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 SLC1A7O00341 560 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 GPR37O15354 613 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 HOXA3O43365 443 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 ACAA1P09110 424 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 PGA5P0DJD9 388 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 CEBPDP49716 269 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 RCN1Q15293 331 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 CNN3Q15417 329 aaKnown RBP9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 UBE2V2Q15819 145 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 C11orf91Q3C1V1 193 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 TMEM244Q5VVB8 128 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 C9orf139Q6ZV77 190 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 KCTD20Q7Z5Y7 419 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 CALHM1Q8IU99 346 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF676Q8N7Q3 588 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 C3orf56Q8N813 242 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 CCDC54Q8NEL0 328 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 CYGBQ8WWM9 190 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 DCTN5Q9BTE1 182 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 CHST5Q9GZS9 411 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 ZMAT3Q9HA38 289 aaKnown RBP9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 RASL12Q9NYN1 266 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 EXOGQ9Y2C4 368 aaKnown RBP9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 RPL36Q9Y3U8 105 aaKnown RBP9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 KPTNQ9Y664 436 aa9.55□□□□□ -0.88
SMARCE1-203ENST00000377808 IGHV1-69DA0A0B4J2H0 117 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 E9PQ18 207 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 J3QRE1 110 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 FADS2O95864 444 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 IGHV1-69P01742 117 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 GABRB1P18505 474 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 POU3F4P49335 361 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 FUT6P51993 359 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 DLX1P56177 255 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 BPIFB3P59826 476 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 NANOS3P60323 173 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 ISL1P61371 349 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 BLMHQ13867 455 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 SLC9A3R2Q15599 337 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 LPCAT4Q643R3 524 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 LY6G5BQ8NDX9 201 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 OR13C3Q8NGS6 347 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 RHOXF1Q8NHV9 184 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 PP6455Q8WZ26 134 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 SLAMF9Q96A28 289 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 FGGYQ96C11 551 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 C1orf147Q96MC9 270 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 PKIBQ9C010 78 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 FRRS1LQ9P0K9 344 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 MYRFQ9Y2G1 1151 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms