RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CABLES2Q9BTV7 478 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 C12orf10Q9HB07 376 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SCPEP1Q9HB40 452 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 ALG1L2C9J202 215 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SUMO1P63165 101 aaKnown RBP9.66□□□□□ -0.86
HIF3A-205ENST00000377670 H3F3AP84243 136 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 C3AR1Q16581 482 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 BTNL8Q6UX41 500 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 CATSPERDQ86XM0 798 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 BPIFCQ8NFQ6 507 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 CCL19Q99731 98 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 PLEKHF2Q9H8W4 249 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SLCO1B1Q9Y6L6 691 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 RIF1Q5UIP0 2472 aaKnown RBP9.66□□□□□ -0.86
HIF3A-205ENST00000377670 A0A1W2PQF6 199 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 RFPL4AA6NLU0 287 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 RFPL4AL1F8VTS6 287 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 ADAM20O43506 726 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SSSCA1O60232 199 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 NTN1O95631 604 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SNRPEP62304 92 aaKnown RBP9.66□□□□□ -0.86
HIF3A-205ENST00000377670 OR2L13Q8N349 312 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 OR5AP2Q8NGF4 316 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 MOB3AQ96BX8 217 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 RSRP1Q9BUV0 290 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SLIRPQ9GZT3 109 aaKnown RBP9.66□□□□□ -0.86
HIF3A-205ENST00000377670 OR51I2Q9H344 312 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 RHOFQ9HBH0 211 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 CLCF1Q9UBD9 225 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 DVL1O14640 695 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SP1P08047 785 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 METTL15P1P0C7V9 234 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 LIFP15018 202 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 DVL1P1P54792 670 aaPredicted RBP9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SLC25A35Q3KQZ1 300 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 ELFN2Q5R3F8 820 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 ETFRF1Q6IPR1 90 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 VN1R4Q7Z5H5 301 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 OR51H1Q8NH63 302 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 PPP1R1CQ8WVI7 109 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 TMEM18Q96B42 140 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 SLC35D1Q9NTN3 355 aa9.66□□□□□ -0.86
HIF3A-205ENST00000377670 RBBP6Q7Z6E9 1792 aaKnown RBP9.65□□□□□ -0.86
HIF3A-205ENST00000377670 ARID2Q68CP9 1835 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 SDCBPO00560 298 aaPredicted RBP9.65□□□□□ -0.86
HIF3A-205ENST00000377670 CD37P11049 281 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 FABP4P15090 132 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 PCBP3P57721 371 aaKnown RBP9.65□□□□□ -0.86
HIF3A-205ENST00000377670 IGSF11Q5DX21 431 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 ZNF626Q68DY1 528 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 D2HGDHQ8N465 521 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 MOB1AQ9H8S9 216 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 KLK11Q9UBX7 282 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 CKAP5Q14008 2032 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 ERHP84090 104 aaKnown RBP9.65□□□□□ -0.86
HIF3A-205ENST00000377670 BAMBIQ13145 260 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 FAHD1Q6P587 224 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 ORAI1Q96D31 301 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 LRFN3Q9BTN0 628 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 CACNA1GO43497 2377 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 MYO16Q9Y6X6 1858 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 C9orf172C9J069 976 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 CHRM2P08172 466 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 SDHAP31040 664 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 DOC2BQ14184 412 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 CDC20BQ86Y33 519 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 OR8D4Q8NGM9 314 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 LRFN5Q96NI6 719 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 OR2A5Q96R48 311 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 SAP30LQ9HAJ7 183 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 MIA3Q5JRA6 1907 aa9.65□□□□□ -0.86
HIF3A-205ENST00000377670 LOC107986453A0A1B0GWG9 222 aa9.65□□□□□ -0.87
HIF3A-205ENST00000377670 IFITM5A6NNB3 132 aa9.65□□□□□ -0.87
HIF3A-205ENST00000377670 ST8SIA5O15466 376 aa9.65□□□□□ -0.87
HIF3A-205ENST00000377670 HAAOP46952 286 aa9.65□□□□□ -0.87
HIF3A-205ENST00000377670 HOXA4Q00056 320 aaPredicted RBP9.65□□□□□ -0.87
HIF3A-205ENST00000377670 DUSP8Q13202 625 aa9.65□□□□□ -0.87
HIF3A-205ENST00000377670 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.65□□□□□ -0.87
HIF3A-205ENST00000377670 XAF1Q6GPH4 301 aa9.65□□□□□ -0.87
HIF3A-205ENST00000377670 WDR88Q6ZMY6 472 aa9.65□□□□□ -0.87
HIF3A-205ENST00000377670 TSEN54Q7Z6J9 526 aaKnown RBP9.65□□□□□ -0.87
HIF3A-205ENST00000377670 COMMD1Q8N668 190 aa9.65□□□□□ -0.87
HIF3A-205ENST00000377670 OR4C3Q8NH37 302 aa9.65□□□□□ -0.87
HIF3A-205ENST00000377670 PINX1Q96BK5 328 aaKnown RBP9.65□□□□□ -0.87
HIF3A-205ENST00000377670 G3V3Q6 166 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 WDR1O75083 606 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 HRH1P35367 487 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 LINC00303Q3SY05 128 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 PLXDC2Q6UX71 529 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 OR51E1Q8TCB6 317 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 PLA2G12AQ9BZM1 189 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF586Q9NXT0 402 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 GDF2Q9UK05 429 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-205ENST00000377670 TRBV23-1A0A0A0MS06 115 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 CALCRP30988 508 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 KIRREL2Q6UWL6 708 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 NUDCD2Q8WVJ2 157 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 SEH1LQ96EE3 360 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 CMC2Q9NRP2 79 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 KCNG2Q9UJ96 466 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms