RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 RAB7AP51149 207 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 CTF1Q16619 201 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 Q1RN00 199 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 DHRS7BQ6IAN0 325 aaPredicted RBP16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 TRAT1Q6PIZ9 186 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 WDR61Q9GZS3 305 aaKnown RBP16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 CCL2P13500 99 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 KCNJ3P48549 501 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 KLF3P57682 345 aaPredicted RBP16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 NXPH1P58417 271 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 PPP1CBP62140 327 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 ETFRF1Q6IPR1 90 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 TM4SF19Q96DZ7 209 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 GAL3ST2Q9H3Q3 398 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 KCNE1BA0A087WTH5 132 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 PLPP2O43688 288 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 TRIP6Q15654 476 aaKnown RBP16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 FA2HQ7L5A8 372 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 C6orf201Q7Z4U5 140 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 SLC26A1Q9H2B4 701 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 PGA3P0DJD8 388 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 COX7A1P24310 79 aa16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 YBX2Q9Y2T7 364 aaKnown RBP16.93■□□□□ 0.3
TBC1D4-201ENST00000377625 PLCH1Q4KWH8 1693 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 NDUFB6O95139 128 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 FGF2P09038 288 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 TUBAL3A6NHL2 446 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 HYAL3O43820 417 aaPredicted RBP16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 GP1BAP07359 652 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 HOXC4P09017 264 aaPredicted RBP16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 SRD5A2P31213 254 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 GALNSP34059 522 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 DEGS2Q6QHC5 323 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 HSBP1O75506 76 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 JMJD6Q6NYC1 403 aaPredicted RBP16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 ZNF429Q86V71 674 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 ZNF561Q8N587 486 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 RASL12Q9NYN1 266 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 CELA2BP08218 269 aaPredicted RBP16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 AMTP48728 403 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 SLC38A11Q08AI6 406 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 TMEM211Q6ICI0 200 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 TCTE3Q8IZS6 198 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 OR2I1PQ8NGU4 316 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 ZG16BQ96DA0 208 aa16.92■□□□□ 0.3
TBC1D4-201ENST00000377625 IGHV3-43A0A0B4J1X8 118 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 IGHV3-43DP0DP04 118 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 FGF9P31371 208 aaPredicted RBP16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 CD96P40200 585 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 KIAA0040Q15053 153 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 OR5D13Q8NGL4 314 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 IL36GQ9NZH8 169 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 OR3A4PP47883 348 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 PLPP3O14495 311 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 SFTA3P0C7M3 94 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 HOXB3P14651 431 aaPredicted RBP16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 PWWP2BQ6NUJ5 590 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 ZNF707Q96C28 371 aaPredicted RBP16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 NEIL1Q96FI4 390 aaPredicted RBP16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 SMOC1Q9H4F8 434 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 SLC25A5P05141 298 aaKnown RBP16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 CDKN2AP42771 156 aaKnown RBP16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 MIDNQ504T8 468 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 OR2D2Q9H210 308 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 ZNF71Q9NQZ8 489 aaPredicted RBP16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 C3orf85A0A1B0GTC6 90 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 C3orf80F5H4A9 247 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 RNASEK-C17orf49H0YIS7 233 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 HTRA4P83105 476 aaPredicted RBP16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 INSL4Q14641 139 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 HES3Q5TGS1 186 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 LYPD8Q6UX82 237 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 RAB40CQ96S21 281 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 PLSCR3Q9NRY6 295 aa16.91■□□□□ 0.3
TBC1D4-201ENST00000377625 hADV38S2A0JD32 116 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 CST4P01036 141 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 PRRX1P54821 245 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 AANATQ16613 207 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 CARFQ8N187 725 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 NTNG2Q96CW9 530 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 MBTPS2O43462 519 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 WNT1P04628 370 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 TMIGD3P0DMS9 266 aaPredicted RBP16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 MSRB3Q8IXL7 192 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 EXOGQ9Y2C4 368 aaKnown RBP16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 TOX3O15405 576 aaPredicted RBP16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 TPPP2P59282 170 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 NUFIP2Q7Z417 695 aaKnown RBP16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 OR1L4Q8NGR5 311 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 GPR137Q96N19 417 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 C12orf10Q9HB07 376 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 A0A1B0GTH9 108 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 SFT2D2O95562 160 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 PATE4P0C8F1 98 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 PPP1CAP62136 330 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 WDR34Q96EX3 536 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 NOL4LQ96MY1 436 aaPredicted RBP16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 SERTM1A2A2V5 107 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 ZNF425Q6IV72 752 aa16.9■□□□□ 0.3
TBC1D4-201ENST00000377625 SEBOXQ9HB31 216 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms