RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 DEFA5Q01523 94 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 CNN3Q15417 329 aaKnown RBP10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 RSPO4Q2I0M5 234 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 MST1LQ2TV78 715 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 PABPC1L2AQ5JQF8 200 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 PDSS1Q5T2R2 415 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 RIPPLY2Q5TAB7 128 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 ABLIM2Q6H8Q1 611 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 ZNF774Q6NX45 483 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 H3F3CQ6NXT2 135 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 OR51F2Q8NH61 342 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 ADAMTS17Q8TE56 1095 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 CNTNAP3BQ96NU0 1288 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 CNTNAP3Q9BZ76 1288 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 NKX6-2Q9C056 277 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 ELL3Q9HB65 397 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 CRLF2Q9HC73 371 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 ZNF701Q9NV72 531 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 TUBD1Q9UJT1 453 aa10.23□□□□□ -0.77
TNFRSF9-201ENST00000377507 B4E171 279 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 SIGLEC5O15389 551 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 NUPL2O15504 423 aaKnown RBP10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 KNG1P01042 644 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 HKR1P10072 659 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 ADCYAP1P18509 176 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 TSPAN7P41732 249 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 SIGLEC14Q08ET2 396 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 SPEM2Q0P670 501 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 ZNF585AQ6P3V2 769 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 LHFPL2Q6ZUX7 228 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 SGPP2Q8IWX5 399 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 OR2AE1Q8NHA4 323 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 MAFAQ8NHW3 353 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 TMED6Q8WW62 240 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 ARL11Q969Q4 196 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 SAT2Q96F10 170 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 SMIM8Q96KF7 97 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 HDHD3Q9BSH5 251 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 LIME1Q9H400 295 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 RGCCQ9H4X1 137 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 MMP26Q9NRE1 261 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 IL36GQ9NZH8 169 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 LPAR3Q9UBY5 353 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 CARHSP1Q9Y2V2 147 aaKnown RBP10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 KIAA1549Q9HCM3 1950 aa10.22□□□□□ -0.77
TNFRSF9-201ENST00000377507 A0A0G2JMM0 328 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 A0A1W2PPB8 328 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 A0A1W2PRS3 328 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 FAM74A7A6NL05 159 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 KIR3DP1A8MWS1 328 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 MASP2O00187 686 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 P04436 131 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 HOXB5P09067 269 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 ICAM2P13598 275 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 ZNF708P17019 499 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 ZNF32P17041 273 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 CHATP28329 748 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 RBMXP38159 391 aaKnown RBP10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 RBP2P50120 134 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 EIF5AP63241 154 aaKnown RBP10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 Q0VFX4 171 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 ZNF169Q14929 603 aaPredicted RBP10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 RSU1Q15404 277 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 FAM74A3Q4VXF1 159 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 IL34Q6ZMJ4 242 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 PPP1R32Q7Z5V6 425 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 YRDCQ86U90 279 aaKnown RBP10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 CLRN3Q8NCR9 226 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 OR5T2Q8NGG2 359 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 OR4A4PQ8NGN8 299 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 AIFM2Q9BRQ8 373 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 FAAP24Q9BTP7 215 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 SLC39A1Q9NY26 324 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 AK3Q9UIJ7 227 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 TIMM10BQ9Y5J6 103 aa10.21□□□□□ -0.77
TNFRSF9-201ENST00000377507 LRRC3CA6NJW4 275 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 ANGPTL7O43827 346 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 OR5H8P0DN80 308 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 CLDN15P56746 228 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 PSG4Q00888 419 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 TAF9Q16594 264 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 CCDC157Q569K6 752 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 AAED1Q7RTV5 226 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 SVBPQ8N300 66 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 BOLLQ8N9W6 283 aaKnown RBP10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 GALNT14Q96FL9 552 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 POM121Q96HA1 1249 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 MICU1Q9BPX6 476 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 ZC4H2Q9NQZ6 224 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 ZNF629Q9UEG4 869 aaPredicted RBP10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 PURGQ9UJV8 347 aaKnown RBP10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 PADI1Q9ULC6 663 aa10.21□□□□□ -0.78
TNFRSF9-201ENST00000377507 IGKV1-12A0A0C4DH73 117 aa10.2□□□□□ -0.78
TNFRSF9-201ENST00000377507 hCG_38984A0A1B0GV85 526 aa10.2□□□□□ -0.78
TNFRSF9-201ENST00000377507 FAM230AA0A1W2PPH8 454 aa10.2□□□□□ -0.78
TNFRSF9-201ENST00000377507 PATE3B3GLJ2 98 aa10.2□□□□□ -0.78
TNFRSF9-201ENST00000377507 TPD52L2O43399 206 aaKnown RBP10.2□□□□□ -0.78
TNFRSF9-201ENST00000377507 SPRY1O43609 319 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF9-201ENST00000377507 DEDDO75618 318 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms