RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 ADH4P08319 380 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 TNFRSF1AP19438 455 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 SERPINA2P20848 420 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 PPOXP50336 477 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 BMXP51813 675 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 GMFBP60983 142 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 PCGF3Q3KNV8 242 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 C2orf76Q3KRA6 126 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 FAM209AQ5JX71 171 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 HIST2H2BCQ6DN03 193 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 OR10K2Q6IF99 312 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 C11orf71Q6IPW1 123 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 ZNF826PQ6ZT77 177 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 MOGAT3Q86VF5 341 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 OR10K1Q8NGX5 313 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 FAM46BQ96A09 425 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 PKIBQ9C010 78 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 METTL9Q9H1A3 318 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 TREM2Q9NZC2 230 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 FBXO9Q9UK97 447 aaPredicted RBP10.97□□□□□ -0.65
CBWD3-203ENST00000377344 POLDIP2Q9Y2S7 368 aa10.97□□□□□ -0.65
CBWD3-203ENST00000377344 USP9YO00507 2555 aaPredicted RBP10.97□□□□□ -0.65
CBWD3-203ENST00000377344 TRAPPC2LH3BP13 241 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 TMEM127O75204 238 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 CRTAPO75718 401 aaPredicted RBP10.96□□□□□ -0.65
CBWD3-203ENST00000377344 BPNT1O95861 308 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 CSTBP04080 98 aaKnown RBP10.96□□□□□ -0.65
CBWD3-203ENST00000377344 CD55P08174 381 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 UBBP0CG47 229 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 CALCBP10092 127 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 CFPP27918 469 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 RANBP1P43487 201 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 IL24Q13007 206 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 TESK1Q15569 626 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 C20orf204Q6ZNR8 217 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 SAMD12Q8N8I0 201 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 OR5H6Q8NGV6 325 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 TBC1D15Q8TC07 691 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 ZNF488Q96MN9 340 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 MRI1Q9BV20 369 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 RAB1BQ9H0U4 201 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 MMP27Q9H306 513 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 FN3KRPQ9HA64 309 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 OR5V1Q9UGF6 321 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 PPP1R3CQ9UQK1 317 aa10.96□□□□□ -0.65
CBWD3-203ENST00000377344 CRYBG3Q68DQ2 2970 aa10.96□□□□□ -0.66
CBWD3-203ENST00000377344 A0A075B6Q4 140 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 IGKV1-12A0A0C4DH73 117 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 CTDSP2O14595 271 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 CLPXO76031 633 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 HTR3BO95264 441 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 IGKV1D-12P01611 117 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 VSIG8P0DPA2 414 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 MPZP25189 248 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 RBMXP38159 391 aaKnown RBP10.95□□□□□ -0.66
CBWD3-203ENST00000377344 CDKN1AP38936 164 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 CAPZA1P52907 286 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 C11orf53Q8IXP5 236 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 ZSCAN4Q8NAM6 433 aaPredicted RBP10.95□□□□□ -0.66
CBWD3-203ENST00000377344 PXT1Q8NFP0 134 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 C14orf79Q96F83 325 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 GAL3ST1Q99999 423 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 CST11Q9H112 138 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 BANF2Q9H503 90 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 GCM1Q9NP62 436 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 MTCH1Q9NZJ7 389 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 GHRLQ9UBU3 117 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 SPATA2Q9UM82 520 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 DOPEY2Q9Y3R5 2298 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 TMEM272A0A1B0GTI8 110 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 A0A1W2PP11 408 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 AKR7A2O43488 359 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 CDC14BO60729 498 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 HPGDSO60760 199 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 KDM4BO94953 1096 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 MPIG6BO95866 241 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 SFTPBP07988 381 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 BCL3P20749 454 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 S100A5P33763 92 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 NPBWR2P48146 333 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 GPR176Q14439 515 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 WDR82Q6UXN9 313 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 SAXO1Q8IYX7 474 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 BOLLQ8N9W6 283 aaKnown RBP10.95□□□□□ -0.66
CBWD3-203ENST00000377344 TMEM104Q8NE00 496 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 KCNG3Q8TAE7 436 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 CEP19Q96LK0 163 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 C1orf147Q96MC9 270 aaPredicted RBP10.95□□□□□ -0.66
CBWD3-203ENST00000377344 CCL19Q99731 98 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 NXF2Q9GZY0 626 aaKnown RBP10.95□□□□□ -0.66
CBWD3-203ENST00000377344 TLNRD1Q9H1K6 362 aa10.95□□□□□ -0.66
CBWD3-203ENST00000377344 RAI1Q7Z5J4 1906 aaPredicted RBP10.94□□□□□ -0.66
CBWD3-203ENST00000377344 FAM25AB3EWG3 89 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 FAM25CB3EWG5 89 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 FAM25GB3EWG6 89 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 C3orf80F5H4A9 247 aa10.94□□□□□ -0.66
CBWD3-203ENST00000377344 ZNF780AO75290 641 aaPredicted RBP10.94□□□□□ -0.66
CBWD3-203ENST00000377344 PTBP3O95758 552 aaKnown RBP10.94□□□□□ -0.66
CBWD3-203ENST00000377344 HPXP02790 462 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms