RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 HHLA2Q9UM44 414 aa18.33■□□□□ 0.52
SRM-201ENST00000376957 TRAV40A0A0B4J280 105 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 SLC1A7O00341 560 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 NXPH2O95156 264 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 VENTXO95231 258 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 ACAA1P09110 424 aaPredicted RBP18.32■□□□□ 0.52
SRM-201ENST00000376957 IL18R1Q13478 541 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 ZNF788Q6ZQV5 615 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 FAM216BQ8N7L0 139 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 ANGPTL6Q8NI99 470 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 H1FXQ92522 213 aaKnown RBP18.32■□□□□ 0.52
SRM-201ENST00000376957 ZMAT3Q9HA38 289 aaKnown RBP18.32■□□□□ 0.52
SRM-201ENST00000376957 MRPS18AQ9NVS2 196 aaKnown RBP18.32■□□□□ 0.52
SRM-201ENST00000376957 ERVK13-1Q9NX77 482 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 ZNF69Q9UC07 566 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 AASSQ9UDR5 926 aa18.32■□□□□ 0.52
SRM-201ENST00000376957 FBN1P35555 2871 aaKnown RBP18.31■□□□□ 0.52
SRM-201ENST00000376957 H3BSH0 61 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 SIGLEC5O15389 551 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 NOS1APO75052 506 aaPredicted RBP18.31■□□□□ 0.52
SRM-201ENST00000376957 IGHA1P01876 353 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 CCDC159P0C7I6 412 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 NDUFB7P17568 137 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 PRKACBP22694 351 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 CAV3P56539 151 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 SRSF2Q01130 221 aaKnown RBP18.31■□□□□ 0.52
SRM-201ENST00000376957 IL24Q13007 206 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 ALKBH1Q13686 389 aaKnown RBP18.31■□□□□ 0.52
SRM-201ENST00000376957 BLMHQ13867 455 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 KLF17Q5JT82 389 aaPredicted RBP18.31■□□□□ 0.52
SRM-201ENST00000376957 TMPRSS11AQ6ZMR5 421 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 ACP7Q6ZNF0 438 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 TRMT10AQ8TBZ6 339 aaKnown RBP18.31■□□□□ 0.52
SRM-201ENST00000376957 FAM216AQ8WUB2 273 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 SEH1LQ96EE3 360 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 PELI1Q96FA3 418 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 DCLRE1BQ9H816 532 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 CHCHD3Q9NX63 227 aaKnown RBP18.31■□□□□ 0.52
SRM-201ENST00000376957 KPTNQ9Y664 436 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 COL6A5A8TX70 2615 aa18.31■□□□□ 0.52
SRM-201ENST00000376957 PGA5P0DJD9 388 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 MYL12AP19105 171 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 DCKP27707 260 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 KIR3DL2P43630 455 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 CAPZA1P52907 286 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 ATP1B3P54709 279 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 ACTG1P63261 375 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 ZNF691Q5VV52 312 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 C9orf139Q6ZV77 190 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 RDH10Q8IZV5 341 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 ZNF561Q8N587 486 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 DNAAF1Q8NEP3 725 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 OR13C3Q8NGS6 347 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 MYRFQ9Y2G1 1151 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 HSPE1-MOB4S4R3N1 261 aa18.3■□□□□ 0.52
SRM-201ENST00000376957 CUBNO60494 3623 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 A0A1W2PPH5 198 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 A0A1W2PQ09 198 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 TMEM212A6NML5 194 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 PLATP00750 562 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 PSG2P11465 335 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 MPZP25189 248 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 PEX2P28328 305 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 RBP2P50120 134 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 ARF6P62330 175 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 GABPB1Q06547 395 aaPredicted RBP18.29■□□□□ 0.52
SRM-201ENST00000376957 UBE2V2Q15819 145 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 FIP1L1Q6UN15 594 aaKnown RBP18.29■□□□□ 0.52
SRM-201ENST00000376957 Q8IYB0 196 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 SIGLECL1Q8N7X8 197 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 TMEM185AQ8NFB2 350 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 OR52I1Q8NGK6 324 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 NPRL2Q8WTW4 380 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 GATAD2BQ8WXI9 593 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 GAFA1Q96PS6 74 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 DCTN5Q9BTE1 182 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 ONECUT1Q9UBC0 465 aa18.29■□□□□ 0.52
SRM-201ENST00000376957 RFPL4AA6NLU0 287 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 RFPL4AL1F8VTS6 287 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 IGHV4-38-2P0DP08 117 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 BAMBIQ13145 260 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 UTS2BQ765I0 119 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 MKXQ8IYA7 352 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 KIR3DL3Q8N743 410 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 OR5AK2Q8NH90 309 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 TBC1D15Q8TC07 691 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 ZDHHC16Q969W1 377 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 SPSB1Q96BD6 273 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 FGGYQ96C11 551 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 SDSLQ96GA7 329 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 NRIP2Q9BQI9 281 aa18.28■□□□□ 0.52
SRM-201ENST00000376957 FGF20Q9NP95 211 aaPredicted RBP18.28■□□□□ 0.52
SRM-201ENST00000376957 IGKV1D-17A0A075B6S4 117 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 IGHV3OR16-10A0A075B7F0 116 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 H0YAE9 185 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 SYNGR1O43759 233 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 PRDX2P32119 198 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 MTCP1P56278 107 aa18.27■□□□□ 0.52
SRM-201ENST00000376957 NANOS3P60323 173 aaKnown RBP18.27■□□□□ 0.52
SRM-201ENST00000376957 GUCA2AQ02747 115 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms