RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ANGPTL6Q8NI99 470 aa17.55■□□□□ 0.4
VSX1-202ENST00000376709 PIGCQ92535 297 aa17.55■□□□□ 0.4
VSX1-202ENST00000376709 APH1AQ96BI3 265 aa17.55■□□□□ 0.4
VSX1-202ENST00000376709 C1QTNF5Q9BXJ0 243 aa17.55■□□□□ 0.4
VSX1-202ENST00000376709 PRDM14Q9GZV8 571 aa17.55■□□□□ 0.4
VSX1-202ENST00000376709 PPA2Q9H2U2 334 aa17.55■□□□□ 0.4
VSX1-202ENST00000376709 ARGFXA6NJG6 315 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 CEACAM18A8MTB9 384 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 FPR2P25090 351 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 TAF9Q16594 264 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 ALKAL2Q6UX46 152 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 MCEMP1Q8IX19 187 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 OR13G1Q8NGZ3 307 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 PPP1R1CQ8WVI7 109 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 BCO1Q9HAY6 547 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 ASPMQ8IZT6 3477 aa17.54■□□□□ 0.4
VSX1-202ENST00000376709 ZNF816-ZNF321PA0A0X1KG74 233 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 RPL36A-HNRNPH2H7BZ11 118 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 I3L521 148 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 CA11O75493 328 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 FUT6P51993 359 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 ATP1B3P54709 279 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 SLC10A1Q14973 349 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 MOB3CQ70IA8 216 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.53■□□□□ 0.4
VSX1-202ENST00000376709 CCDC28AQ8IWP9 274 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 ATPIF1Q9UII2 106 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 ZNF724A8MTY0 619 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 HLA-HP01893 362 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 RRASP10301 218 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 PI3P19957 117 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 RNPS1Q15287 305 aaKnown RBP17.53■□□□□ 0.4
VSX1-202ENST00000376709 C11orf87Q6NUJ2 197 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 TMEM185AQ8NFB2 350 aa17.53■□□□□ 0.4
VSX1-202ENST00000376709 EMG1Q92979 244 aaKnown RBP17.53■□□□□ 0.4
VSX1-202ENST00000376709 C5orf51A6NDU8 294 aa17.52■□□□□ 0.4
VSX1-202ENST00000376709 FIGNL2A6NMB9 653 aa17.52■□□□□ 0.4
VSX1-202ENST00000376709 FOXG1P55316 489 aaPredicted RBP17.52■□□□□ 0.4
VSX1-202ENST00000376709 ARG2P78540 354 aa17.52■□□□□ 0.4
VSX1-202ENST00000376709 AADACL3Q5VUY0 350 aa17.52■□□□□ 0.4
VSX1-202ENST00000376709 RPUSD3Q6P087 351 aaKnown RBP17.52■□□□□ 0.4
VSX1-202ENST00000376709 OVCH2Q7RTZ1 564 aa17.52■□□□□ 0.4
VSX1-202ENST00000376709 VASH2Q86V25 355 aa17.52■□□□□ 0.4
VSX1-202ENST00000376709 LHFPL1Q86WI0 220 aa17.52■□□□□ 0.4
VSX1-202ENST00000376709 TECTBQ96PL2 329 aa17.52■□□□□ 0.4
VSX1-202ENST00000376709 HDHD3Q9BSH5 251 aaPredicted RBP17.52■□□□□ 0.4
VSX1-202ENST00000376709 LDAHQ9H6V9 325 aa17.52■□□□□ 0.4
VSX1-202ENST00000376709 C5orf49A4QMS7 147 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 TUBAL3A6NHL2 446 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 EEF1E1-BLOC1S5C9J1V9 151 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 STK11Q15831 433 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 SIGIRRQ6IA17 410 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 TMEM65Q6PI78 240 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 PEG10Q86TG7 708 aaKnown RBP17.52■□□□□ 0.39
VSX1-202ENST00000376709 SPSB4Q96A44 273 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 FAAP24Q9BTP7 215 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 FAM86C1Q9NVL1 165 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 OSGIN2Q9Y236 505 aa17.52■□□□□ 0.39
VSX1-202ENST00000376709 ZNF292O60281 2723 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 C13orf42A0A1B0GVH6 325 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 POM121CA8CG34 1229 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 B3GALNT1O75752 331 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 ACTL6AO96019 429 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 CD79AP11912 226 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 CCL2P13500 99 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 ARPC4P59998 168 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 AANATQ16613 207 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 ZFP62Q8NB50 900 aaPredicted RBP17.51■□□□□ 0.39
VSX1-202ENST00000376709 OR6K3Q8NGY3 331 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 TMEM230Q96A57 120 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 DEFB127Q9H1M4 99 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 RNF122Q9H9V4 155 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 KIF25Q9UIL4 384 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 TMA7Q9Y2S6 64 aaKnown RBP17.51■□□□□ 0.39
VSX1-202ENST00000376709 LIPGQ9Y5X9 500 aa17.51■□□□□ 0.39
VSX1-202ENST00000376709 A0A0D9SG52 128 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 DBX1A6NMT0 343 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 CDRT15L2A8MXV6 281 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 PDGFAP04085 211 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 MPGP29372 298 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 NUBP1P53384 320 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 TCF15Q12870 199 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 PDZK1IP1Q13113 114 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 SRSF6Q13247 344 aaKnown RBP17.5■□□□□ 0.39
VSX1-202ENST00000376709 ATXN7L3Q14CW9 347 aaPredicted RBP17.5■□□□□ 0.39
VSX1-202ENST00000376709 SLC9A3R2Q15599 337 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 ASCL4Q6XD76 172 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 COLCA1Q6ZS62 124 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 RFPL4BQ6ZWI9 263 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 OSR2Q8N2R0 312 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 ZSCAN4Q8NAM6 433 aaPredicted RBP17.5■□□□□ 0.39
VSX1-202ENST00000376709 COQ8AQ8NI60 647 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 SCARB1Q8WTV0 552 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 RTBDNQ9BSG5 229 aaPredicted RBP17.5■□□□□ 0.39
VSX1-202ENST00000376709 ACKR4Q9NPB9 350 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 RDH8Q9NYR8 311 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 HSF4Q9ULV5 492 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 IGKV1D-8A0A087WSZ0 117 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 IGKV1-12A0A0C4DH73 117 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 ZNF850A8MQ14 1090 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms