RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PHYHD1Q5SRE7 291 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 C6orf15Q6UXA7 325 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 TMEM92Q6UXU6 159 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 S100A7AQ86SG5 101 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 OR2V1Q8NHB1 315 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 NAA60Q9H7X0 242 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 SH3BGRL2Q9UJC5 107 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 SF3B6Q9Y3B4 125 aaKnown RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 IGHV1OR21-1A0A087WYE8 117 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 SOCS1O15524 211 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 OR5AC1P0C628 307 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 ANKRD34CP0C6C1 535 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 PPIAP62937 165 aaKnown RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 SCGB2A2Q13296 93 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 BTNL8Q6UX41 500 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 TSEN54Q7Z6J9 526 aaKnown RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 TMEM52Q8NDY8 209 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 PINX1Q96BK5 328 aaKnown RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 BSCL2Q96G97 398 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 ALX4Q9H161 411 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 SSUH2Q9Y2M2 353 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 V9GYS6 101 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 MED19A0JLT2 244 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-203ENST00000375274 NMBP08949 121 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 RFC3P40938 356 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 NPBWR1P48145 328 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 GABRA4P48169 554 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 GSK3AP49840 483 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 OR8B8Q15620 311 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 PRSS53Q2L4Q9 553 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 TIGITQ495A1 244 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 MRGPREQ86SM8 312 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 NUBPLQ8TB37 319 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 RPS4Y2Q8TD47 263 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 ERGIC1Q969X5 290 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 GABRG3Q99928 467 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 ZNF391Q9UJN7 358 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 POMT1Q9Y6A1 747 aa10.26□□□□□ -0.77
PTCH1-203ENST00000375274 CEP250Q9BV73 2442 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 FAM24AA6NFZ4 105 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 CLDN34H7C241 214 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 ENSAO43768 121 aaKnown RBP10.25□□□□□ -0.77
PTCH1-203ENST00000375274 PDCD6O75340 191 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 GPR12P47775 334 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 MEOX2P50222 304 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 NOVA1P51513 510 aaKnown RBP10.25□□□□□ -0.77
PTCH1-203ENST00000375274 FUT5Q11128 374 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 SMUG1Q53HV7 270 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 FAM58AQ8N1B3 248 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 OR11G2Q8NGC1 345 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 OR10D4PQ8NGN7 298 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 APOBEC3DQ96AK3 386 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-203ENST00000375274 CCDC74BQ96LY2 380 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 NMES1Q9C002 83 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 TMPRSS5Q9H3S3 457 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 DOCK3Q8IZD9 2030 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 G3V3Q6 166 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 TERTO14746 1132 aaKnown RBP10.25□□□□□ -0.77
PTCH1-203ENST00000375274 MOSPD3O75425 235 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 FABP1P07148 127 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 FAM157BP0CG42 384 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 SLC25A4P12235 298 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 DTYMKP23919 212 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 IL13RA2Q14627 380 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 SLC10A1Q14973 349 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 SURF2Q15527 256 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-203ENST00000375274 OR8B12Q8NGG6 310 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 ADGRG7Q96K78 797 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 EDEM2Q9BV94 578 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 IGKV1-8A0A0C4DH67 115 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 SELEP16581 610 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 GPM6AP51674 278 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 SKP2Q13309 424 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 FAM109BQ6ICB4 259 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-203ENST00000375274 PRR13Q9NZ81 148 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 LPAR3Q9UBY5 353 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 ZNF32P17041 273 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 CXCL2P19875 107 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 PEBP1P30086 187 aaKnown RBP10.25□□□□□ -0.77
PTCH1-203ENST00000375274 DBX2Q6ZNG2 339 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 RFLNBQ8N5W9 214 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 OR4D10Q8NGI6 311 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 ZPLD1Q8TCW7 415 aa10.25□□□□□ -0.77
PTCH1-203ENST00000375274 BRWD3Q6RI45 1802 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 KRASP01116 189 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 NAT1P18440 290 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 MMP16P51512 607 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 TMPRSS7Q7RTY8 843 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 SPEM1Q8N4L4 309 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 LRRC3BQ96PB8 259 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 TWSG1Q9GZX9 223 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 LHX9Q9NQ69 397 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 ANXA10Q9UJ72 324 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 KLF13Q9Y2Y9 288 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-203ENST00000375274 ZNF320A2RRD8 509 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 OR5H15A6NDH6 313 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 C2CD4DB7Z1M9 353 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 ADAM20O43506 726 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 GREM1O60565 184 aa10.24□□□□□ -0.77
PTCH1-203ENST00000375274 CTSDP07339 412 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms