RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 CATP04040 527 aaKnown RBP7.86□□□□□ -1.15
UBR4-201ENST00000375218 REG1AP05451 166 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 ALOX5APP20292 161 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 ITGB7P26010 798 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 SPRP35270 261 aaPredicted RBP7.86□□□□□ -1.15
UBR4-201ENST00000375218 NSG1P42857 185 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 OR6K2Q8NGY2 324 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 BTN2A3PQ96KV6 586 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 TNFRSF12AQ9NP84 129 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 RPL26L1Q9UNX3 145 aaKnown RBP7.86□□□□□ -1.15
UBR4-201ENST00000375218 IGLV3-10A0A075B6K4 115 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 OTOL1A6NHN0 477 aaPredicted RBP7.86□□□□□ -1.15
UBR4-201ENST00000375218 FOXH1O75593 365 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 THY1P04216 161 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 ZNF14P17017 642 aaPredicted RBP7.86□□□□□ -1.15
UBR4-201ENST00000375218 SNRPNP63162 240 aaKnown RBP7.86□□□□□ -1.15
UBR4-201ENST00000375218 TBR1Q16650 682 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 TMEM215Q68D42 235 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 OR4A47Q6IF82 309 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 SLC39A11Q8N1S5 342 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 D2HGDHQ8N465 521 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 HMGCLL1Q8TB92 370 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 RPP25Q9BUL9 199 aaKnown RBP7.86□□□□□ -1.15
UBR4-201ENST00000375218 NRSN2Q9GZP1 204 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 FASP25445 335 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 SULT1A1P50225 295 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 SULT1A2P50226 295 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 ZNF542PQ5EBM4 170 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 COL5A1-AS1Q5SY13 56 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 MRGPRGQ86SM5 289 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 OR9I1Q8NGQ6 314 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 RPLP0P6Q8NHW5 317 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 RPF2Q9H7B2 306 aaKnown RBP7.86□□□□□ -1.15
UBR4-201ENST00000375218 ZNF665Q9H7R5 613 aa7.86□□□□□ -1.15
UBR4-201ENST00000375218 AK4P27144 223 aaPredicted RBP7.85□□□□□ -1.15
UBR4-201ENST00000375218 TAF6P49848 677 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 HIST1H1AQ02539 215 aaPredicted RBP7.85□□□□□ -1.15
UBR4-201ENST00000375218 FZD5Q13467 585 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 FAM71E1Q6IPT2 247 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 STRADAQ7RTN6 431 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 ZNF605Q86T29 641 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 MRPL52Q86TS9 123 aaKnown RBP7.85□□□□□ -1.15
UBR4-201ENST00000375218 ZNF676Q8N7Q3 588 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 RGP1Q92546 391 aaPredicted RBP7.85□□□□□ -1.15
UBR4-201ENST00000375218 DIRAS2Q96HU8 199 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 PRSS21Q9Y6M0 314 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 ANKRD12Q6UB98 2062 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 ZCWPW2A0A1B0GU75 182 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 IFNA7P01567 189 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 CTSLP07711 333 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 SDC1P18827 310 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 CHRNB4P30926 498 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 SLC19A1P41440 591 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 TESK1Q15569 626 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 LINC00471Q8N535 108 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 MS4A15Q8N5U1 240 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 PNLDC1Q8NA58 520 aaKnown RBP7.85□□□□□ -1.15
UBR4-201ENST00000375218 SCCPDHQ8NBX0 429 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 GJC3Q8NFK1 279 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 NEU4Q8WWR8 484 aaPredicted RBP7.85□□□□□ -1.15
UBR4-201ENST00000375218 TMEM37Q8WXS4 190 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 SDSLQ96GA7 329 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 IP6K3Q96PC2 410 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 FANCD2OSQ96PS1 177 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 TMEM38BQ9NVV0 291 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 SLC7A7Q9UM01 511 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 RCL1Q9Y2P8 373 aaKnown RBP7.85□□□□□ -1.15
UBR4-201ENST00000375218 RAXQ9Y2V3 346 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 A0A1W2PRE2 83 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 APOC4-APOC2K7ER74 178 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 APOC2P02655 101 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 GPD1P21695 349 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 AMTP48728 403 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 PAFAH1B3Q15102 231 aaKnown RBP7.85□□□□□ -1.15
UBR4-201ENST00000375218 OR2Y1Q8NGV0 311 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 OR51I2Q9H344 312 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 RALYQ9UKM9 306 aaKnown RBP7.85□□□□□ -1.15
UBR4-201ENST00000375218 KLHDC2Q9Y2U9 406 aa7.85□□□□□ -1.15
UBR4-201ENST00000375218 PDE4DIPQ5VU43 2346 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 PNMA8CA0A1B0GUJ8 204 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 A0A1W2PRD5 423 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 LRRC3CA6NJW4 275 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 FAM159BA6NKW6 160 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 ZNF587BE7ETH6 402 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 WDR1O75083 606 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 TRAPPC6AO75865 159 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 CRYAAP02489 173 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 PTGER1P34995 402 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 KIR2DL2P43627 348 aaPredicted RBP7.84□□□□□ -1.15
UBR4-201ENST00000375218 CX3CR1P49238 355 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 C2orf68Q2NKX9 166 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 B3GNTL1Q67FW5 361 aaPredicted RBP7.84□□□□□ -1.15
UBR4-201ENST00000375218 ZNF485Q8NCK3 441 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 ZNF439Q8NDP4 499 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 OR4D11Q8NGI4 311 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 ARL11Q969Q4 196 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 SCMH1Q96GD3 660 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 LPAR4Q99677 370 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 SLC29A3Q9BZD2 475 aa7.84□□□□□ -1.15
UBR4-201ENST00000375218 FOXQ1Q9C009 403 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms