RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 SLC25A40Q8TBP6 338 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 OR5P3Q8WZ94 311 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 IL36GQ9NZH8 169 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 SH3BGRL2Q9UJC5 107 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 ITPR1Q14643 2758 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 A0A0A6YYJ9 748 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 HMX3A6NHT5 357 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 A8MXE2 369 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 M0QYG6 137 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 CD74P04233 296 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 H2AFB2P0C5Z0 115 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 CPT2P23786 658 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
PTPRF-202ENST00000372405 CALCRP30988 508 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 TAS2R19P59542 299 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 FAM189A2Q15884 450 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 SLC25A26Q70HW3 274 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 FTMTQ8N4E7 242 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 OR1J1Q8NGS3 322 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 OR6F1Q8NGZ6 308 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 ST8SIA4Q92187 359 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 PECRQ9BY49 303 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 TINAGL1Q9GZM7 467 aaPredicted RBP11.81□□□□□ -0.52
PTPRF-202ENST00000372405 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPRF-202ENST00000372405 NKIRAS2Q9NYR9 191 aa11.81□□□□□ -0.52
PTPRF-202ENST00000372405 C7orf66A4D0T2 115 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 ANKRD30BLA7E2S9 258 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 ZNF732B4DXR9 585 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 MSTNO14793 375 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 NDUFB6O95139 128 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 CYB5AP00167 134 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 ZNF735P0CB33 412 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 CA6P23280 308 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 GABRR1P24046 479 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 MPV17P39210 176 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 HAAOP46952 286 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 NPBWR2P48146 333 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 PIGYQ3MUY2 71 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 OR52W1Q6IF63 320 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 C22orf34Q6ZV56 151 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 BATF2Q8N1L9 274 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 OR5A2Q8NGI9 324 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 OR51S1Q8NGJ8 323 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 MARS2Q96GW9 593 aaKnown RBP11.8□□□□□ -0.52
PTPRF-202ENST00000372405 GHITMQ9H3K2 345 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 ZNF107Q9UII5 783 aaPredicted RBP11.8□□□□□ -0.52
PTPRF-202ENST00000372405 ANAPC10Q9UM13 185 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 AMDHD2Q9Y303 409 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 CADP27708 2225 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 SHANK1Q9Y566 2161 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 NBEAQ8NFP9 2946 aa11.8□□□□□ -0.52
PTPRF-202ENST00000372405 IGHV2OR16-5A0A0B4J2B6 119 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 A8MV72 311 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 F8VVB4 439 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 F8VWA3 439 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 ZNF780AO75290 641 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 CSTBP04080 98 aaKnown RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 CCKARP32238 428 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 RCVRNP35243 200 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 RAG2P55895 527 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 FAM27E3Q08E93 113 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 PSG7Q13046 419 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 TAF9Q16594 264 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 TIMM23BQ5SRD1 257 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 UNQ6494/PRO21346Q6UXR6 183 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 C6orf201Q7Z4U5 140 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 LIX1LQ8IVB5 337 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 FBXL14Q8N1E6 418 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 FAM169BQ8N8A8 192 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 ZSCAN4Q8NAM6 433 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 KLF14Q8TD94 323 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 SNAPC3Q92966 411 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 ST6GAL2Q96JF0 529 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 RADILQ96JH8 1075 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 BEX2Q9BXY8 128 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 OR10A4Q9H209 315 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 BEX1Q9HBH7 125 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 POU2F3Q9UKI9 436 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 MPC1Q9Y5U8 109 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 ZNF736B4DX44 427 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 EEF1E1-BLOC1S5C9J1V9 151 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 GEMIN2O14893 280 aaKnown RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 ARPC1BO15143 372 aaKnown RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 CCNKO75909 580 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 RAB3DO95716 219 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 TRAPPC2P0DI81 140 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 TRAPPC2BP0DI82 140 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 RAC2P15153 192 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 OPRM1P35372 400 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 FAUP35544 74 aaKnown RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 GNG2P59768 71 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 PNLIPRP3Q17RR3 467 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 ZNF782Q6ZMW2 699 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 OSR2Q8N2R0 312 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 Q8NFD4 153 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 ZCCHC14Q8WYQ9 949 aaKnown RBP11.79□□□□□ -0.52
PTPRF-202ENST00000372405 FBXW5Q969U6 566 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 SLAMF9Q96A28 289 aa11.79□□□□□ -0.52
PTPRF-202ENST00000372405 PEX14O75381 377 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms