RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 LINC00518Q8N0U6 118 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 GOT1L1Q8NHS2 421 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 AKIP1Q9NQ31 210 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 CXorf51AA0A1B0GTR3 108 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 CISD3P0C7P0 127 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 NIPSNAP1Q9BPW8 284 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 A4GALTQ9NPC4 353 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 DLL4Q9NR61 685 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 FOXJ3Q9UPW0 622 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 PIGLQ9Y2B2 252 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 SELENOFO60613 162 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 YIF1AO95070 293 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 IL2RAP01589 272 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 AGFG1P52594 562 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 UBE2V2Q15819 145 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 CBLN2Q8IUK8 224 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 TUSC5Q8IXB3 177 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 HIST1H1EP10412 219 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 Q56UQ5 140 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 SARAFQ96BY9 339 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 NTNG2Q96CW9 530 aa12.65□□□□□ -0.38
RAPGEF1-202ENST00000372190 A0A1W2PPE2 198 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 ARG1P05089 322 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 Q6ZSR9 355 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 RNF133Q8WVZ7 376 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 MS4A6EQ96DS6 147 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 ZGLP1P0C6A0 271 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 EPHA8P29322 1005 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 OR1C1Q15619 314 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 TMEM183AQ8IXX5 376 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 NANOGP1Q8N7R0 232 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 OR1L6Q8NGR2 347 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 CHST8Q9H2A9 424 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 GLIPR2Q9H4G4 154 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 PEF1Q9UBV8 284 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 FUT9Q9Y231 359 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 QSER1Q2KHR3 1735 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 ERHP84090 104 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 SSBP1Q04837 148 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 BSXQ3C1V8 233 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 OR2L13Q8N349 312 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 PIMREGQ9BSJ6 248 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 NRG2O14511 850 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 PMCHL1Q16048 86 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 SOWAHCQ53LP3 525 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 GFRALQ6UXV0 394 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 MORN4Q8NDC4 146 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 OR5D18Q8NGL1 313 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 OR2I1PQ8NGU4 316 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 TTC9Q92623 222 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 MVB12AQ96EY5 273 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 FSCN3Q9NQT6 498 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 NMUP48645 174 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 C19orf57Q0VDD7 668 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 TFAP2EQ6VUC0 442 aa12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 YRDCQ86U90 279 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 TP53I13Q8NBR0 393 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 RTN4IP1Q8WWV3 396 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-202ENST00000372190 ANKRD31Q8N7Z5 1873 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 A0A0B4J293 547 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 DUS4LO95620 317 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 DNLZQ5SXM8 178 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 FAHD2BQ6P2I3 314 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 OR5M1Q8NGP8 315 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 OR13C6PQ8NH95 151 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 RNF2Q99496 336 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 ZNF430Q9H8G1 570 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 DAPP1Q9UN19 280 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 FIGNL2A6NMB9 653 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 ZNF737O75373 536 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 F13BP05160 661 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 SNRPGP62308 76 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 ADTRPQ96IZ2 230 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 GABRG3Q99928 467 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 NAA60Q9H7X0 242 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 SERGEFQ9UGK8 458 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 CAMPP49913 170 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 MRM1Q6IN84 353 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 MYOZ3Q8TDC0 251 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 SLC25A5P05141 298 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 PIPP12273 146 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 PLPP7Q8NBV4 271 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 SLC38A9Q8NBW4 561 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 ISOC2Q96AB3 205 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 SLCO4A1Q96BD0 722 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 BARHL1Q9BZE3 327 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 CTSFQ9UBX1 484 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 SHANK3Q9BYB0 1731 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 SH2D7A6NKC9 451 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 CSN3P07498 182 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 EPXP11678 715 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 FZD2Q14332 565 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 COX20Q5RI15 118 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 SLC25A33Q9BSK2 321 aa12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 ADAT1Q9BUB4 502 aaKnown RBP12.63□□□□□ -0.39
RAPGEF1-202ENST00000372190 SDK1Q7Z5N4 2213 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms