RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 FARS2O95363 451 aaKnown RBP25.16■■□□□ 1.62
SSBP3-204ENST00000371320 SP9P0CG40 484 aa25.16■■□□□ 1.62
SSBP3-204ENST00000371320 ZNF75AQ96N20 296 aa25.16■■□□□ 1.62
SSBP3-204ENST00000371320 LINC00052Q96N35 136 aa25.16■■□□□ 1.62
SSBP3-204ENST00000371320 SIGLEC12Q96PQ1 595 aa25.16■■□□□ 1.62
SSBP3-204ENST00000371320 RASL12Q9NYN1 266 aa25.16■■□□□ 1.62
SSBP3-204ENST00000371320 PRR13Q9NZ81 148 aa25.16■■□□□ 1.62
SSBP3-204ENST00000371320 NOSIPQ9Y314 301 aaKnown RBP25.16■■□□□ 1.62
SSBP3-204ENST00000371320 IGKV1D-8A0A087WSZ0 117 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 ADAP1O75689 374 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 IGHV3-9P01782 118 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 SRYQ05066 204 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 SURF2Q15527 256 aaPredicted RBP25.15■■□□□ 1.62
SSBP3-204ENST00000371320 TAF9Q16594 264 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 ANKRD55Q3KP44 614 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 TMEM164Q5U3C3 297 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 TMEM42Q69YG0 159 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 RPUSD3Q6P087 351 aaKnown RBP25.15■■□□□ 1.62
SSBP3-204ENST00000371320 ZSCAN4Q8NAM6 433 aaPredicted RBP25.15■■□□□ 1.62
SSBP3-204ENST00000371320 PXT1Q8NFP0 134 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 HDHD3Q9BSH5 251 aaPredicted RBP25.15■■□□□ 1.62
SSBP3-204ENST00000371320 GPR87Q9BY21 358 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 B4GALT7Q9UBV7 327 aa25.15■■□□□ 1.62
SSBP3-204ENST00000371320 A8MXK9 166 aa25.14■■□□□ 1.62
SSBP3-204ENST00000371320 FAM3AP98173 230 aa25.14■■□□□ 1.62
SSBP3-204ENST00000371320 ZNF92Q03936 586 aa25.14■■□□□ 1.62
SSBP3-204ENST00000371320 FAM74A1Q5RGS3 127 aa25.14■■□□□ 1.62
SSBP3-204ENST00000371320 TSPO2Q5TGU0 170 aa25.14■■□□□ 1.62
SSBP3-204ENST00000371320 NSUN5P2Q63ZY6 315 aa25.14■■□□□ 1.62
SSBP3-204ENST00000371320 A0A1B0GW55 424 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 A0A1W2PNU3 283 aaPredicted RBP25.14■■□□□ 1.61
SSBP3-204ENST00000371320 MRPL33O75394 65 aaKnown RBP25.14■■□□□ 1.61
SSBP3-204ENST00000371320 DUX4L2P0CJ85 424 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 DUX4L3P0CJ86 424 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 DUX4L4P0CJ87 422 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 DUX4L5P0CJ88 424 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 DUX4L6P0CJ89 424 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 DUX4L7P0CJ90 424 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 PGAM2P15259 253 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 ZNF100Q8IYN0 542 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 DCUN1D4Q92564 292 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 FAAP24Q9BTP7 215 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 ZNF703Q9H7S9 590 aaPredicted RBP25.14■■□□□ 1.61
SSBP3-204ENST00000371320 DUX4Q9UBX2 424 aa25.14■■□□□ 1.61
SSBP3-204ENST00000371320 hCG_38984A0A1B0GV85 526 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 F5H0A9 414 aaPredicted RBP25.13■■□□□ 1.61
SSBP3-204ENST00000371320 FGF2P09038 288 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 NUP62P37198 522 aaPredicted RBP25.13■■□□□ 1.61
SSBP3-204ENST00000371320 PHYHIPLQ96FC7 376 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 ARPC5LQ9BPX5 153 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 MICU1Q9BPX6 476 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 C14orf166Q9Y224 244 aaKnown RBP25.13■■□□□ 1.61
SSBP3-204ENST00000371320 DOCK10Q96BY6 2186 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 B8ZZF3 427 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 KCNAB3O43448 404 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 MMP7P09237 267 aaPredicted RBP25.13■■□□□ 1.61
SSBP3-204ENST00000371320 PABPC1L2AQ5JQF8 200 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 ASCL4Q6XD76 172 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 HSD17B13Q7Z5P4 300 aaPredicted RBP25.13■■□□□ 1.61
SSBP3-204ENST00000371320 BVESQ8NE79 360 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 HES7Q9BYE0 225 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 ABI3Q9P2A4 366 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 HSF4Q9ULV5 492 aa25.13■■□□□ 1.61
SSBP3-204ENST00000371320 IGKV3D-15A0A087WSY6 115 aa25.12■■□□□ 1.61
SSBP3-204ENST00000371320 C21orf140B9A014 251 aa25.12■■□□□ 1.61
SSBP3-204ENST00000371320 RRP8O43159 456 aaKnown RBP25.12■■□□□ 1.61
SSBP3-204ENST00000371320 CELA3AP09093 270 aa25.12■■□□□ 1.61
SSBP3-204ENST00000371320 LHX2P50458 406 aa25.12■■□□□ 1.61
SSBP3-204ENST00000371320 RNF126Q9BV68 326 aa25.12■■□□□ 1.61
SSBP3-204ENST00000371320 METTL8Q9H825 291 aaKnown RBP25.12■■□□□ 1.61
SSBP3-204ENST00000371320 EDARQ9UNE0 448 aa25.12■■□□□ 1.61
SSBP3-204ENST00000371320 SLC7A11Q9UPY5 501 aa25.12■■□□□ 1.61
SSBP3-204ENST00000371320 FREM2Q5SZK8 3169 aa25.12■■□□□ 1.61
SSBP3-204ENST00000371320 TRBV6-7A0A0A0MS04 114 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 KRBOX1C9JBD0 128 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 KNG1P01042 644 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 CD59P13987 128 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 RPS2P15880 293 aaKnown RBP25.11■■□□□ 1.61
SSBP3-204ENST00000371320 CDCP2Q5VXM1 449 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 ZNF2Q9BSG1 426 aaPredicted RBP25.11■■□□□ 1.61
SSBP3-204ENST00000371320 AK3Q9UIJ7 227 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 M0R296 226 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 ECI1P42126 302 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 FUT6P51993 359 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 ANXA10Q9UJ72 324 aa25.11■■□□□ 1.61
SSBP3-204ENST00000371320 LGALS8O00214 317 aa25.1■■□□□ 1.61
SSBP3-204ENST00000371320 XRCC2O43543 280 aa25.1■■□□□ 1.61
SSBP3-204ENST00000371320 ITGA3P26006 1051 aa25.1■■□□□ 1.61
SSBP3-204ENST00000371320 OR1C1Q15619 314 aa25.1■■□□□ 1.61
SSBP3-204ENST00000371320 NRN1LQ496H8 165 aa25.1■■□□□ 1.61
SSBP3-204ENST00000371320 MOB3CQ70IA8 216 aa25.1■■□□□ 1.61
SSBP3-204ENST00000371320 NAXEQ8NCW5 288 aa25.1■■□□□ 1.61
SSBP3-204ENST00000371320 GALNT11Q8NCW6 608 aa25.1■■□□□ 1.61
SSBP3-204ENST00000371320 ZNF581Q9P0T4 197 aa25.1■■□□□ 1.61
SSBP3-204ENST00000371320 MPTX1A8MV57 137 aa25.09■■□□□ 1.61
SSBP3-204ENST00000371320 OR8B8Q15620 311 aa25.09■■□□□ 1.61
SSBP3-204ENST00000371320 EIF4E3Q8N5X7 224 aaKnown RBP25.09■■□□□ 1.61
SSBP3-204ENST00000371320 CPEB3Q8NE35 698 aaKnown RBP25.09■■□□□ 1.61
SSBP3-204ENST00000371320 PIGCQ92535 297 aa25.09■■□□□ 1.61
SSBP3-204ENST00000371320 CMSS1Q9BQ75 279 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms