RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 OR14J1Q9UGF5 321 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 PIAS3Q9Y6X2 628 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 THADAQ6YHU6 1953 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 SOX15O60248 233 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 MYOGP15173 224 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 GNALP38405 381 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 RND2P52198 227 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 ZNF429Q86V71 674 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 OR13D1Q8NGV5 346 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 EMG1Q92979 244 aaKnown RBP10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 TSACCQ96A04 125 aaPredicted RBP10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 KCNK17Q96T54 332 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 ACTR3CQ9C0K3 210 aaPredicted RBP10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 C1orf123Q9NWV4 160 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 MRPS28Q9Y2Q9 187 aaKnown RBP10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 KCNIP3Q9Y2W7 256 aa10.21□□□□□ -0.77
SMARCA1-201ENST00000371121 A0A1W2PQU0 124 aa10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 XKRYO14609 159 aa10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 SCAF4O95104 1147 aaKnown RBP10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 CHRM2P08172 466 aa10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 GLI4P10075 376 aa10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 SLC37A1P57057 533 aa10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 BEND2Q8NDZ0 799 aa10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 CLDND2Q8NHS1 167 aa10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 PTPMT1Q8WUK0 201 aaPredicted RBP10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 GLRX2Q9NS18 164 aa10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 MMACHCQ9Y4U1 282 aa10.21□□□□□ -0.78
SMARCA1-201ENST00000371121 SHANK1Q9Y566 2161 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 TRAV36DV7A0A075B6V5 113 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 IGSF23A1L1A6 192 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 TSTD3H0UI37 97 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 RSPO4Q2I0M5 234 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 ZFP62Q8NB50 900 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 FAM131CQ96AQ9 280 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 SLC22A18Q96BI1 424 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 MSI2Q96DH6 328 aaKnown RBP10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 BOD1Q96IK1 185 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 DDA1Q9BW61 102 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 TCEAL2Q9H3H9 227 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 PLEKHA2Q9HB19 425 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 DEC1Q9P2X7 70 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 IL33O95760 270 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 TMEM50AO95807 157 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 HPGDP15428 266 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 G0S2P27469 103 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 GLO1Q04760 184 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 TEX38Q6PEX7 206 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 LANCL3Q6ZV70 420 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 C17orf78Q8N4C9 275 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 OR4X1Q8NH49 305 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 FNDC9Q8TBE3 224 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 PECRQ9BY49 303 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 PPP1R14DQ9NXH3 145 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 NCOA6Q14686 2063 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 GPR137BO60478 399 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 OR5AC1P0C628 307 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 AMY2BP19961 511 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 ATP6V0CP27449 155 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 TM4SF4P48230 202 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 GPM6BQ13491 265 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 P2RY6Q15077 328 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 NKAIN1Q4KMZ8 207 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 SSX7Q7RTT5 188 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 ZNF440Q8IYI8 595 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 FBXL14Q8N1E6 418 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 OR4D5Q8NGN0 318 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 ASB10Q8WXI3 467 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 ADIPOR1Q96A54 375 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 ZNF2Q9BSG1 426 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 VN1R1Q9GZP7 353 aa10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 PNRC2Q9NPJ4 139 aaKnown RBP10.2□□□□□ -0.78
SMARCA1-201ENST00000371121 E5RGE8 158 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 OR6A2O95222 327 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 TFF2Q03403 129 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 GALNTL5Q7Z4T8 443 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 OR5D18Q8NGL1 313 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 OR2M4Q96R27 311 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 TMEM59Q9BXS4 323 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 NSG2Q9Y328 171 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 STRAPQ9Y3F4 350 aaKnown RBP10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 LHFPL6Q9Y693 200 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 CDC14CA4D256 554 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 PROB1E7EW31 1015 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 CELA2BP08218 269 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 PGA3P0DJD8 388 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 GZMHP20718 246 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 UBE2KP61086 200 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 CSNK2A1P68400 391 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 RNF4P78317 190 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 MFAP5Q13361 173 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 PRR18Q8N4B5 295 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 CSNK2A3Q8NEV1 391 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 ADAMTS18Q8TE60 1221 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 RERGQ96A58 199 aaPredicted RBP10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 SLAMF6Q96DU3 332 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 LYZL4Q96KX0 146 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 ADOQ96SZ5 270 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 MED29Q9NX70 200 aa10.19□□□□□ -0.78
SMARCA1-201ENST00000371121 FER1L5A0AVI2 2057 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms