RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 A0A087WUU8 490 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 A0A087WXM4 84 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 KIR2DS1A0A191URI9 304 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 GOSR2O14653 212 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 MT-ND4P03905 459 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 CRYGDP07320 174 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 SFTPBP07988 381 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 MAOAP21397 527 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 RCVRNP35243 200 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 APOBEC1P41238 236 aaKnown RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 CRISP1P54107 249 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 KIR2DS1Q14954 304 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 CNPY1Q3B7I2 92 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 NKAPLQ5M9Q1 402 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 C6orf52Q5T4I8 152 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 C9orf135Q5VTT2 229 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 TCEAL6Q6IPX3 200 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 KIRREL2Q6UWL6 708 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 ZNF367Q7RTV3 350 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 MFSD4AQ8N468 514 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 TMEM99Q8N816 258 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 OR6T1Q8NGN1 323 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 OR4A4PQ8NGN8 299 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 OR2AE1Q8NHA4 323 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 S100PBPQ96BU1 408 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 ZNF837Q96EG3 531 aaPredicted RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 C3orf14Q9HBI5 128 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 GNG12Q9UBI6 72 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 ANAPC10Q9UM13 185 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 MYRFQ9Y2G1 1151 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 OR2M5A3KFT3 312 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 ZNF878C9JN71 531 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 CDC40O60508 579 aaKnown RBP eCLIP3.33□□□□□ -1.88
MCF2-203ENST00000370576 ANXA3P12429 323 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 ARSBP15848 533 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 HTR1FP30939 366 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 NTSP30990 170 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 PAX9P55771 341 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 IL5RAQ01344 420 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 OR1Q1Q15612 314 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 GRK1Q15835 563 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 SPIN3Q5JUX0 258 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 IDNKQ5T6J7 187 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 NXNL2Q5VZ03 156 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 ANKRD34AQ69YU3 496 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 ADAD2Q8NCV1 583 aaKnown RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 IL17DQ8TAD2 202 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 PATE1Q8WXA2 126 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 MAFIPQ8WZ33 124 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 DACT3Q96B18 629 aaPredicted RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 GTPBP2Q9BX10 602 aaKnown RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 ASB6Q9NWX5 421 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 TMED7Q9Y3B3 224 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 CDH10Q9Y6N8 788 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 DMDP11532 3685 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 CEP290O15078 2479 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 PHF3Q92576 2039 aaKnown RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 PCNX3Q9H6A9 2034 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 IRGMA1A4Y4 181 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 SMIM9A6NGZ8 99 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 H0YL77 283 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 GP1BBP13224 206 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 GATA1P15976 413 aaPredicted RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 EPHA2P29317 976 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 IFNGR2P38484 337 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 DNASE1L1P49184 302 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 RAB40BQ12829 278 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 ASAH1Q13510 395 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 UBXN2BQ14CS0 331 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 TRMT12Q53H54 448 aaKnown RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 VAX1Q5SQQ9 334 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 SPSB3Q6PJ21 355 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 DHRSXQ8N5I4 330 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 GPR119Q8TDV5 335 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 NEU4Q8WWR8 484 aaPredicted RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 TRAF4Q9BUZ4 470 aaPredicted RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 SLIRPQ9GZT3 109 aaKnown RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 MIXL1Q9H2W2 232 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 CMC2Q9NRP2 79 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 HRASLS2Q9NWW9 162 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 WDR45Q9Y484 360 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 CHCHD2Q9Y6H1 151 aaPredicted RBP3.33□□□□□ -1.88
MCF2-203ENST00000370576 NUMA1Q14980 2115 aa3.33□□□□□ -1.88
MCF2-203ENST00000370576 CACNA1EQ15878 2313 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 TRAPPC13A5PLN9 417 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 PSPNO60542 156 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 AQP8O94778 261 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 CCL1P22362 96 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 AADACP22760 399 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 FUT6P51993 359 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 NCBP2P52298 156 aaKnown RBP eCLIP3.32□□□□□ -1.88
MCF2-203ENST00000370576 EMX1Q04741 257 aaPredicted RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 ZNF585BQ52M93 769 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 DNLZQ5SXM8 178 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 FAM19A5Q7Z5A7 132 aaPredicted RBP3.32□□□□□ -1.88
MCF2-203ENST00000370576 ZDHHC13Q8IUH4 622 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 CLIP4Q8N3C7 705 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 SLC16A11Q8NCK7 471 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR52N4Q8NGI2 321 aa3.32□□□□□ -1.88
MCF2-203ENST00000370576 OR51Q1Q8NH59 317 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms