RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 MOB3BQ86TA1 216 aa17.48■□□□□ 0.39
LMO4-202ENST00000370544 TRMT61AQ96FX7 289 aaKnown RBP17.48■□□□□ 0.39
LMO4-202ENST00000370544 ADGRG7Q96K78 797 aa17.48■□□□□ 0.39
LMO4-202ENST00000370544 MRM2Q9UI43 246 aaKnown RBP17.48■□□□□ 0.39
LMO4-202ENST00000370544 RFPL4AA6NLU0 287 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 RFPL4AL1F8VTS6 287 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 PATE4P0C8F1 98 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 SLC37A1P57057 533 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 ETFDHQ16134 617 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 C6orf201Q7Z4U5 140 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 BPIFCQ8NFQ6 507 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 POM121L2Q96KW2 1035 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 LRRC3BQ96PB8 259 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 DUSP15Q9H1R2 295 aaPredicted RBP17.47■□□□□ 0.39
LMO4-202ENST00000370544 RRASP10301 218 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 MDH2P40926 338 aaKnown RBP17.47■□□□□ 0.39
LMO4-202ENST00000370544 PPP1CBP62140 327 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 SIGLEC14Q08ET2 396 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 SP6Q3SY56 376 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 TIGITQ495A1 244 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 BTNL8Q6UX41 500 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 RXFP4Q8TDU9 374 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 CNTD2Q9H8S5 307 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 TRBV5-3A0A0A0MS03 114 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 IGHV5-10-1A0A0J9YXX1 117 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 OR2M5A3KFT3 312 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 LIPT2A6NK58 231 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 CD96P40200 585 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 ZNF90Q03938 601 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 PTPMT1Q8WUK0 201 aaPredicted RBP17.47■□□□□ 0.39
LMO4-202ENST00000370544 TVP23CQ96ET8 276 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 PLPPR2Q96GM1 343 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 NPIPB8E9PQR5 432 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 EIF4EBP2Q13542 120 aaPredicted RBP17.47■□□□□ 0.39
LMO4-202ENST00000370544 LSMEM1Q8N8F7 131 aa17.47■□□□□ 0.39
LMO4-202ENST00000370544 GP1BAP07359 652 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 PEBP1P30086 187 aaKnown RBP17.46■□□□□ 0.39
LMO4-202ENST00000370544 CLPPQ16740 277 aaPredicted RBP17.46■□□□□ 0.39
LMO4-202ENST00000370544 C8orf82Q6P1X6 216 aaPredicted RBP17.46■□□□□ 0.39
LMO4-202ENST00000370544 NUFIP2Q7Z417 695 aaKnown RBP17.46■□□□□ 0.39
LMO4-202ENST00000370544 COX7A2P2O60397 106 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 PMP22Q01453 160 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 C1QL3Q5VWW1 255 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 MED30Q96HR3 178 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 ONECUT1Q9UBC0 465 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 UBE2L5PA0A1B0GUS4 154 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 VMA21Q3ZAQ7 101 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 SPRED2Q7Z698 418 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 NECAP1Q8NC96 275 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 FAM90A27PA6NNH2 459 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 SOX8P57073 446 aa17.46■□□□□ 0.39
LMO4-202ENST00000370544 PDGFBP01127 241 aaPredicted RBP17.46■□□□□ 0.38
LMO4-202ENST00000370544 CTRB1P17538 263 aa17.46■□□□□ 0.38
LMO4-202ENST00000370544 PHYHD1Q5SRE7 291 aa17.46■□□□□ 0.38
LMO4-202ENST00000370544 CTRB2Q6GPI1 263 aa17.46■□□□□ 0.38
LMO4-202ENST00000370544 TMEM230Q96A57 120 aa17.46■□□□□ 0.38
LMO4-202ENST00000370544 ZNF251Q9BRH9 671 aa17.46■□□□□ 0.38
LMO4-202ENST00000370544 PLSCR3Q9NRY6 295 aa17.46■□□□□ 0.38
LMO4-202ENST00000370544 NTN1O95631 604 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 KRASP01116 189 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 NPEPL1Q8NDH3 523 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 SF3B5Q9BWJ5 86 aaKnown RBP17.45■□□□□ 0.38
LMO4-202ENST00000370544 V9GYS6 101 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 TMIGD3P0DMS9 266 aaPredicted RBP17.45■□□□□ 0.38
LMO4-202ENST00000370544 GNG10P50151 68 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 STUMQ69YW2 141 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 OR8B12Q8NGG6 310 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 ERRFI1Q9UJM3 462 aaPredicted RBP17.45■□□□□ 0.38
LMO4-202ENST00000370544 CST7O76096 145 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 DMKNQ6E0U4 476 aaPredicted RBP17.45■□□□□ 0.38
LMO4-202ENST00000370544 LRRC29Q8WV35 223 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 TM4SF19Q96DZ7 209 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 TMPRSS13Q9BYE2 586 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 TUBAL3A6NHL2 446 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 TMEM108Q6UXF1 575 aa17.45■□□□□ 0.38
LMO4-202ENST00000370544 DEFB108AA8MXU0 73 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 SFT2D2O95562 160 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 SKP2Q13309 424 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 OR5B3Q8NH48 314 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 SMIM7Q9BQ49 75 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 SLC26A1Q9H2B4 701 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 OR51I2Q9H344 312 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 F5P12259 2224 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 PDCD6O75340 191 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 NDFIP1Q9BT67 221 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 SLC25A4P12235 298 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 KLF3P57682 345 aaPredicted RBP17.44■□□□□ 0.38
LMO4-202ENST00000370544 DEFA6Q01524 100 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 ENDOGQ14249 297 aaKnown RBP17.44■□□□□ 0.38
LMO4-202ENST00000370544 IGFBP7Q16270 282 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 TRAT1Q6PIZ9 186 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 ZAR1Q86SH2 424 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 SKA3Q8IX90 412 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 OR13D1Q8NGV5 346 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 PRRX2Q99811 253 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 ONECUT2O95948 504 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 ACSM4P0C7M7 580 aa17.44■□□□□ 0.38
LMO4-202ENST00000370544 TAGLNQ01995 201 aaKnown RBP17.44■□□□□ 0.38
LMO4-202ENST00000370544 TMED3Q9Y3Q3 217 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms