RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SLC25A26Q70HW3 274 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 GCSAMQ8N6F7 178 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 SLAMF9Q96A28 289 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 SEH1LQ96EE3 360 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 MRPS26Q9BYN8 205 aaKnown RBP11.68□□□□□ -0.54
TPM3-211ENST00000368531 REG4Q9BYZ8 158 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 TMEM138Q9NPI0 162 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 FOXJ3Q9UPW0 622 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 PPIAL4AQ9Y536 164 aa11.68□□□□□ -0.54
TPM3-211ENST00000368531 IGHV4-61A0A0C4DH41 118 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 H7C1Q1 480 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 ANGPTL7O43827 346 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 SC5DO75845 299 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 ALX3O95076 343 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 TMEM225BP0DP42 221 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 SLC25A16P16260 332 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 FSTP19883 344 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 BTG1P62324 171 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 CIARTQ8N365 385 aaPredicted RBP11.67□□□□□ -0.54
TPM3-211ENST00000368531 OR5T2Q8NGG2 359 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 FAM192AQ9GZU8 254 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 WDR13Q9H1Z4 485 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 OR51E2Q9H255 320 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 SNTG1Q9NSN8 517 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 POLDIP2Q9Y2S7 368 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 TACC2O95359 2948 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 CR1P17927 2039 aa11.67□□□□□ -0.54
TPM3-211ENST00000368531 CSMD2Q7Z408 3487 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 LOC100506127A0A0U1RQW1 187 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 TRDV1A0A1B0GX56 115 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 GPX5O75715 221 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 CYB5AP00167 134 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 LHBP01229 141 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 IGHV2-70P01814 119 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 UCHL1P09936 223 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 CALCBP10092 127 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 SRMP19623 302 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 USF1P22415 310 aaPredicted RBP11.66□□□□□ -0.54
TPM3-211ENST00000368531 GLRA1P23415 457 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 GADD45AP24522 165 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 CALRP27797 417 aaKnown RBP11.66□□□□□ -0.54
TPM3-211ENST00000368531 ZNF93P35789 620 aaPredicted RBP11.66□□□□□ -0.54
TPM3-211ENST00000368531 C22orf42Q6IC83 251 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 CRIP3Q6Q6R5 217 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 JAGN1Q8N5M9 183 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 OR10Z1Q8NGY1 313 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 OR51F2Q8NH61 342 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 TMIGD2Q96BF3 282 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 GAL3ST1Q99999 423 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 CHCHD6Q9BRQ6 235 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 PKIBQ9C010 78 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 SLITRK2Q9H156 845 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 ELL3Q9HB65 397 aaPredicted RBP11.66□□□□□ -0.54
TPM3-211ENST00000368531 DNAJB11Q9UBS4 358 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 STUB1Q9UNE7 303 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 SSR3Q9UNL2 185 aa11.66□□□□□ -0.54
TPM3-211ENST00000368531 YLPM1P49750 1951 aaKnown RBP11.65□□□□□ -0.54
TPM3-211ENST00000368531 OOEPA6NGQ2 149 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 SRRM5B3KS81 715 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 LGALS8O00214 317 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 ARL6IP5O75915 188 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 NXPH2O95156 264 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 GYPAP02724 150 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 TFF1P04155 84 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 ALDOBP05062 364 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 ADRA2CP18825 462 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 CFHR2P36980 270 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 MDH2P40926 338 aaKnown RBP11.65□□□□□ -0.54
TPM3-211ENST00000368531 OR3A4PP47883 348 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 IL24Q13007 206 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 PDZK1IP1Q13113 114 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 LRRTM1Q86UE6 522 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 LRRC28Q86X40 367 aaPredicted RBP11.65□□□□□ -0.54
TPM3-211ENST00000368531 MKXQ8IYA7 352 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 POC1AQ8NBT0 407 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 CLDND2Q8NHS1 167 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 TNFAIP8L1Q8WVP5 186 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 YIPF6Q96EC8 236 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 TMEM165Q9HC07 324 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 TXNL4BQ9NX01 149 aaKnown RBP11.65□□□□□ -0.54
TPM3-211ENST00000368531 MTCH1Q9NZJ7 389 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 PCDHB10Q9UN67 800 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 ING4Q9UNL4 249 aa11.65□□□□□ -0.54
TPM3-211ENST00000368531 AK6Q9Y3D8 172 aaKnown RBP11.65□□□□□ -0.54
TPM3-211ENST00000368531 NAV2Q8IVL1 2488 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 TRAV38-1A0A0B4J264 116 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 IGKV1-12A0A0C4DH73 117 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 MEGF11A6BM72 1044 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 F8VVB4 439 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 F8VWA3 439 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 TRAPPC2LH3BP13 241 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.64□□□□□ -0.55
TPM3-211ENST00000368531 IGKV1D-12P01611 117 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 PGA5P0DJD9 388 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 BCL3P20749 454 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 MPZP25189 248 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 IL2RGP31785 369 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 NPBWR2P48146 333 aa11.64□□□□□ -0.55
TPM3-211ENST00000368531 SNU13P55769 128 aaKnown RBP11.64□□□□□ -0.55
TPM3-211ENST00000368531 ZP1P60852 638 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms