RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 A0A1W2PRV1 198 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 A6NLC8 198 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 ACAA1P09110 424 aaPredicted RBP9.25□□□□□ -0.93
SMC3-201ENST00000361804 ACKR3P25106 362 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 IL15RAQ13261 267 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 AVPI1Q5T686 147 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 Q7L0L9 218 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 SDHAF3Q9NRP4 125 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 PLEKHJ1Q9NW61 149 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 ZNF726A6NNF4 738 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 K7EPK0 472 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 CYCSP99999 105 aaKnown RBP9.24□□□□□ -0.93
SMC3-201ENST00000361804 LYZL2Q7Z4W2 148 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 FAM71E2Q8N5Q1 922 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 HSD17B11Q8NBQ5 300 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 OR5L1Q8NGL2 311 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 RNF138Q8WVD3 245 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 SMIM8Q96KF7 97 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 URM1Q9BTM9 101 aaKnown RBP9.24□□□□□ -0.93
SMC3-201ENST00000361804 WIF1Q9Y5W5 379 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 CSMD1Q96PZ7 3565 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 MTRF1O75570 445 aaKnown RBP9.24□□□□□ -0.93
SMC3-201ENST00000361804 FCGR3AP08637 254 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 STARD6P59095 220 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 HGFACQ04756 655 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 MIDNQ504T8 468 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 KRBOX4Q5JUW0 171 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 RD3LP0DJH9 198 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 IGFBP4P22692 258 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 RBMXP38159 391 aaKnown RBP9.24□□□□□ -0.93
SMC3-201ENST00000361804 HOXA1P49639 335 aaPredicted RBP9.24□□□□□ -0.93
SMC3-201ENST00000361804 NAAAQ02083 359 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 PNLIPRP3Q17RR3 467 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 PIGYQ3MUY2 71 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 KIRREL1Q96J84 757 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 CNTNAP3Q9BZ76 1288 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMC3-201ENST00000361804 MYOTQ9UBF9 498 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 IGKV1-27A0A075B6S5 117 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 A0A1W2PPH5 198 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 DKK1O94907 266 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 IFNA2P01563 188 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 OR5AC1P0C628 307 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 NHLH2Q02577 135 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 FAM76BQ5HYJ3 339 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 ZNF385CQ66K41 422 aaPredicted RBP9.24□□□□□ -0.93
SMC3-201ENST00000361804 SUMF1Q8NBK3 374 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 PLPP5Q8NEB5 264 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 OR52M1Q8NGK5 317 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 SSC4DQ8WTU2 575 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 OIT3Q8WWZ8 545 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 PHF7Q9BWX1 381 aaPredicted RBP9.24□□□□□ -0.93
SMC3-201ENST00000361804 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 ANAPC10Q9UM13 185 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 TECTAO75443 2155 aa9.24□□□□□ -0.93
SMC3-201ENST00000361804 DIDO1Q9BTC0 2240 aaKnown RBP9.23□□□□□ -0.93
SMC3-201ENST00000361804 FAM157AC9JC47 383 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 SCRG1O75711 98 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 TBPP20226 339 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 ITGA3P26006 1051 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 MEOX2P50222 304 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 PIGPP57054 158 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 GUSBP11Q6P575 273 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 BTNL8Q6UX41 500 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 DOK3Q7L591 496 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 SULF2Q8IWU5 870 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 OR2M3Q8NG83 312 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 PIGQQ9BRB3 760 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 ABHD14AQ9BUJ0 271 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 EDARQ9UNE0 448 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 FBXO7Q9Y3I1 522 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 FREM1Q5H8C1 2179 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 A0A1W2PNV4 684 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 MBPP02686 304 aaPredicted RBP9.23□□□□□ -0.93
SMC3-201ENST00000361804 OR2B8PP59922 312 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 TMEM268Q5VZI3 342 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 CPEB2Q7Z5Q1 589 aaKnown RBP9.23□□□□□ -0.93
SMC3-201ENST00000361804 TMEM156Q8N614 296 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 FNDC9Q8TBE3 224 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 RASL10BQ96S79 203 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 S100A13Q99584 98 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 PLEK2Q9NYT0 353 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 ZDHHC8Q9ULC8 765 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 C14orf166Q9Y224 244 aaKnown RBP9.23□□□□□ -0.93
SMC3-201ENST00000361804 FIGNL2A6NMB9 653 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 ZNF850A8MQ14 1090 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 FOXI3A8MTJ6 420 aaPredicted RBP9.23□□□□□ -0.93
SMC3-201ENST00000361804 M0R036 132 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 CEBPGP53567 150 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 GPR85P60893 370 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 CTAG1AP78358 180 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 ENDOGQ14249 297 aaKnown RBP9.23□□□□□ -0.93
SMC3-201ENST00000361804 AWAT1Q58HT5 328 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 ZNF468Q5VIY5 522 aaPredicted RBP9.23□□□□□ -0.93
SMC3-201ENST00000361804 BIN3Q9NQY0 253 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 AK3Q9UIJ7 227 aa9.23□□□□□ -0.93
SMC3-201ENST00000361804 DCHS2Q6V1P9 2916 aa9.22□□□□□ -0.93
SMC3-201ENST00000361804 LINC00587B1AMM8 73 aa9.22□□□□□ -0.93
SMC3-201ENST00000361804 OR13C7P0DN81 318 aa9.22□□□□□ -0.93
SMC3-201ENST00000361804 ZNF44P15621 663 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms