RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CYB5R3P00387 301 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 IGHV2-70P01814 119 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 HEXAP06865 529 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 PGA5P0DJD9 388 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 USF1P22415 310 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 FGF9P31371 208 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 PDZK1IP1Q13113 114 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 MICBQ29980 383 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 TIMM50Q3ZCQ8 353 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 TEX36Q5VZQ5 186 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 GDPGP1Q6ZNW5 385 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 SPICQ8N5J4 248 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 GCSAMQ8N6F7 178 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 POC1AQ8NBT0 407 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 NPRL2Q8WTW4 380 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 LRRC29Q8WV35 223 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 FOXRED1Q96CU9 486 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 REG4Q9BYZ8 158 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 TCF7L1Q9HCS4 588 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 TREM2Q9NZC2 230 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 STUB1Q9UNE7 303 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 AKAP9Q99996 3911 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 DYSFO75923 2080 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 VPS13CQ709C8 3753 aa11.62□□□□□ -0.55
NSMCE1-201ENST00000361439 A0A096LNT2 108 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 OOEPA6NGQ2 149 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 LGALS8O00214 317 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 SMIM18P0DKX4 95 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 PSMD7P51665 324 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 BMXP51813 675 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 FABP5Q01469 135 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 DMRTC1Q5HYR2 192 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 ZNF826PQ6ZT77 177 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 CALHM1Q8IU99 346 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 PNLDC1Q8NA58 520 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 PXT1Q8NFP0 134 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 OR51A2Q8NGJ7 313 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 NRIP2Q9BQI9 281 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 UQCC2Q9BRT2 126 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 DNTTIP1Q9H147 329 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 METTL17Q9H7H0 456 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 TMEM165Q9HC07 324 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 SNTG1Q9NSN8 517 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 GSTK1Q9Y2Q3 226 aa11.61□□□□□ -0.55
NSMCE1-201ENST00000361439 TRAV8-7A0A075B6U6 113 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 TRAV1-2A0A0B4J238 106 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 A0A1W2PPK0 400 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 RHBDL1O75783 438 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 CD37P11049 281 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 FOSL1P15407 271 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 CD36P16671 472 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 ZNF93P35789 620 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 ERVK11-1P61568 191 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 INSL4Q14641 139 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 ZMYND11Q15326 602 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 SMIM21Q3B7S5 101 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 ZNF404Q494X3 552 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 DDI2Q5TDH0 399 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 GLT8D1Q68CQ7 371 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 ANGPTL5Q86XS5 388 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 OR52N4Q8NGI2 321 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 OR51F2Q8NH61 342 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 CEP19Q96LK0 163 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 SEBOXQ9HB31 216 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 HES4Q9HCC6 221 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 PCDHB16Q9NRJ7 776 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 DCAF16Q9NXF7 216 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 SSR3Q9UNL2 185 aa11.6□□□□□ -0.55
NSMCE1-201ENST00000361439 TRAPPC2LH3BP13 241 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 AKR7A2O43488 359 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 SYNGR1O43759 233 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 ZNF780AO75290 641 aaPredicted RBP11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 KDM4BO94953 1096 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 MAS1P04201 325 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 GLRA1P23415 457 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 CALRP27797 417 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 PTGFRP43088 359 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 ZP1P60852 638 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 C11orf91Q3C1V1 193 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 ATPAF1Q5TC12 328 aaPredicted RBP11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 CRIP3Q6Q6R5 217 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 FIP1L1Q6UN15 594 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 ASCL4Q6XD76 172 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 DCDC5Q6ZRR9 648 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 SLC25A26Q70HW3 274 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 LRRTM1Q86UE6 522 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 TMIGD2Q96BF3 282 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 RAB39BQ96DA2 213 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 C1orf159Q96HA4 380 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 GPER1Q99527 375 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 PPIL3Q9H2H8 161 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 MTCH1Q9NZJ7 389 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 KAAG1Q9UBP8 84 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 GHRLQ9UBU3 117 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 MIOXQ9UGB7 285 aa11.59□□□□□ -0.55
NSMCE1-201ENST00000361439 IGHV4-61A0A0C4DH41 118 aa11.58□□□□□ -0.56
NSMCE1-201ENST00000361439 ISPDA4D126 451 aa11.58□□□□□ -0.56
NSMCE1-201ENST00000361439 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
NSMCE1-201ENST00000361439 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.58□□□□□ -0.56
NSMCE1-201ENST00000361439 PDCD5O14737 125 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms