RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ZNF775Q96BV0 537 aaPredicted RBP12.08□□□□□ -0.47
CSNK1E-201ENST00000359867 SNRNP40Q96DI7 357 aaKnown RBP12.08□□□□□ -0.47
CSNK1E-201ENST00000359867 WDYHV1Q96HA8 205 aa12.08□□□□□ -0.47
CSNK1E-201ENST00000359867 TMPRSS13Q9BYE2 586 aa12.08□□□□□ -0.47
CSNK1E-201ENST00000359867 OR51M1Q9H341 326 aa12.08□□□□□ -0.47
CSNK1E-201ENST00000359867 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.47
CSNK1E-201ENST00000359867 MTFP1Q9UDX5 166 aa12.08□□□□□ -0.47
CSNK1E-201ENST00000359867 A0A0U1RQV5 110 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 LDLRAD4O15165 306 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 IGLV3-1P01715 115 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 RAB6AP20340 208 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 GPX4P36969 197 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 ZNF660Q6AZW8 331 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 FAM57BQ71RH2 274 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 ABHD12BQ7Z5M8 362 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 TMED4Q7Z7H5 227 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 ADGRE4PQ86SQ3 457 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 CBLN2Q8IUK8 224 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 SLC22A24Q8N4F4 322 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 C12orf45Q8N5I9 185 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 BOLLQ8N9W6 283 aaKnown RBP12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 ADAT1Q9BUB4 502 aaKnown RBP12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 CRLF2Q9HC73 371 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 GPR84Q9NQS5 396 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 MBD2Q9UBB5 411 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 CGGBP1Q9UFW8 167 aaPredicted RBP12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 SLC5A6Q9Y289 635 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 RHBDD3Q9Y3P4 386 aa12.08□□□□□ -0.48
CSNK1E-201ENST00000359867 LY86O95711 162 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 ECH1Q13011 328 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 C9orf152Q5JTZ5 239 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 ALKBH2Q6NS38 261 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 FNDC9Q8TBE3 224 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 SPTSSAQ969W0 71 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 FBXO17Q96EF6 278 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 PGAM5Q96HS1 289 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 MFFQ9GZY8 342 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 ZMAT3Q9HA38 289 aaKnown RBP12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 ASF1BQ9NVP2 202 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 ZNF319Q9P2F9 582 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 M0QYG6 137 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 SYNGR4O95473 234 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 IFNA4P05014 189 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 SMIM6P0DI80 62 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 SLC2A1P11166 492 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 FAUP35544 74 aaKnown RBP12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 SNRPEP62304 92 aaKnown RBP12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 RELQ04864 619 aaPredicted RBP12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 RAB35Q15286 201 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 Q6ZSR3 168 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 ABHD3Q8WU67 409 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 LINC00470Q9BZP3 86 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 ATG5Q9H1Y0 275 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 RNF122Q9H9V4 155 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 PLEK2Q9NYT0 353 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 TAS2R8Q9NYW2 309 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 AQP7O14520 342 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 CSN2P05814 226 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 SSBP1Q04837 148 aaKnown RBP12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 KLRB1Q12918 225 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 TSC22D1Q15714 1073 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 NRN1LQ496H8 165 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 LRRC37A5PQ49AS3 106 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 BEX5Q5H9J7 111 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 COMMD2Q86X83 199 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 POFUT1Q9H488 388 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 PARPBPQ9NWS1 579 aa12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 MCTS1Q9ULC4 181 aaKnown RBP12.07□□□□□ -0.48
CSNK1E-201ENST00000359867 ZFYVE26Q68DK2 2539 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 ZGRF1Q86YA3 2104 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 COL6A6A6NMZ7 2263 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 SULT1C2O00338 296 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 PTGFRP43088 359 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 MECP2P51608 486 aaKnown RBP12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 RSPO1Q2MKA7 263 aaPredicted RBP12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 ZNF324BQ6AW86 544 aaPredicted RBP12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 BEND4Q6ZU67 534 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 PDZD9Q8IXQ8 264 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 OR52N4Q8NGI2 321 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 OR14K1Q8NGZ2 314 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 GLYATL2Q8WU03 294 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 NARS2Q96I59 477 aaKnown RBP12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 FOXB1Q99853 325 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 CNTD2Q9H8S5 307 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 GPR35Q9HC97 309 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 RAB22AQ9UL26 194 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 PHF3Q92576 2039 aaKnown RBP12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 F5H5K5 113 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 M0R135 149 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 GPR31O00270 319 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 GPR37O15354 613 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 BPNT1O95861 308 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 CSF1P09603 554 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 AKAIN1P0CW23 69 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 PCBD1P61457 104 aa12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 ATXN7L3Q14CW9 347 aaPredicted RBP12.06□□□□□ -0.48
CSNK1E-201ENST00000359867 ZNF627Q7L945 461 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms