RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 KIR3DP1A8MWS1 328 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 EFSO43281 561 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 SFT2D2O95562 160 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 RFPL3SP0C7P2 107 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 PAN3Q58A45 887 aaKnown RBP9.8□□□□□ -0.84
SSU72-202ENST00000359060 LHFPL2Q6ZUX7 228 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 RNF141Q8WVD5 230 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 MARC2Q969Z3 335 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 CHST5Q9GZS9 411 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 EIF5A2Q9GZV4 153 aaKnown RBP9.8□□□□□ -0.84
SSU72-202ENST00000359060 SLC26A1Q9H2B4 701 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 SLC25A32Q9H2D1 315 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 CDH20Q9HBT6 801 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 M0R036 132 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 CNOT4O95628 575 aaKnown RBP9.8□□□□□ -0.84
SSU72-202ENST00000359060 ZBTB25P24278 435 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 PHYHD1Q5SRE7 291 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 ASPHD2Q6ICH7 369 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 BIVMQ86UB2 503 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 RTN4RL2Q86UN3 420 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 TMEM200AQ86VY9 491 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 PAQR4Q8N4S7 273 aaPredicted RBP9.8□□□□□ -0.84
SSU72-202ENST00000359060 OR56B2PQ8NGI1 322 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 OR5M9Q8NGP3 310 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 OR6K3Q8NGY3 331 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 RTN4IP1Q8WWV3 396 aaPredicted RBP9.8□□□□□ -0.84
SSU72-202ENST00000359060 RDH5Q92781 318 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 SGK3Q96BR1 496 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 C2orf50Q96LR7 162 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 IMMP1LQ96LU5 166 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 ZNF107Q9UII5 783 aaPredicted RBP9.8□□□□□ -0.84
SSU72-202ENST00000359060 DNAH14Q0VDD8 3507 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 TUBAL3A6NHL2 446 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 XRCC2O43543 280 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 ZIC3O60481 467 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 NXPH3O95157 252 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 HPNP05981 417 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 CRHP06850 196 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 PTGDSP41222 190 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 CAMLGP49069 296 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 MRPL49Q13405 166 aaKnown RBP9.8□□□□□ -0.84
SSU72-202ENST00000359060 ZNF660Q6AZW8 331 aaPredicted RBP9.8□□□□□ -0.84
SSU72-202ENST00000359060 PSMF1Q92530 271 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 MS4A7Q9GZW8 240 aaPredicted RBP9.8□□□□□ -0.84
SSU72-202ENST00000359060 HEXA-AS1Q9H8Q6 139 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 PRELID1Q9Y255 219 aa9.8□□□□□ -0.84
SSU72-202ENST00000359060 ZNF816-ZNF321PA0A0X1KG74 233 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 H7C2Y5 167 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 HS3ST1O14792 307 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 SIGLEC5O15389 551 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 EDN3P14138 238 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 GSK3AP49840 483 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 SIGLEC14Q08ET2 396 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 ZNF169Q14929 603 aaPredicted RBP9.79□□□□□ -0.84
SSU72-202ENST00000359060 STK11Q15831 433 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 PLAC9Q5JTB6 97 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 TSPO2Q5TGU0 170 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 FAM27BQ5VT28 67 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 ASB13Q8WXK3 278 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 FBXO17Q96EF6 278 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 TMEM38BQ9NVV0 291 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 GEMIN2O14893 280 aaKnown RBP9.79□□□□□ -0.84
SSU72-202ENST00000359060 B3GALNT1O75752 331 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 SLC34A2O95436 690 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 TSPAN15O95858 294 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 OR8U9P0C7N5 309 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 PPIAP62937 165 aaKnown RBP9.79□□□□□ -0.84
SSU72-202ENST00000359060 PIGYQ3MUY2 71 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 SPATA46Q5T0L3 261 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 FAM166AQ6J272 317 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 IQCF2Q8IXL9 164 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 KCNRGQ8N5I3 272 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 LRRC46Q96FV0 321 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 FAM173AQ9BQD7 235 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 SZT2Q5T011 3432 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 C5orf63A6NC05 138 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 KLRC4-KLRK1H3BQV0 150 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 KLF7O75840 302 aaPredicted RBP9.79□□□□□ -0.84
SSU72-202ENST00000359060 CD74P04233 296 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 GPM6AP51674 278 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 CLN3Q13286 438 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 SLC25A53Q5H9E4 307 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 HSD17B11Q8NBQ5 300 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 FER1L6-AS2Q96M78 137 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 IER2Q9BTL4 223 aa9.79□□□□□ -0.84
SSU72-202ENST00000359060 SF3B5Q9BWJ5 86 aaKnown RBP9.79□□□□□ -0.84
SSU72-202ENST00000359060 ADAM10O14672 748 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 GP1BAP07359 652 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 MAGEA5P43359 124 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 RAB1AP62820 205 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 ENDOGQ14249 297 aaKnown RBP9.78□□□□□ -0.84
SSU72-202ENST00000359060 FAM209AQ5JX71 171 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 CMTM1Q8IZ96 169 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 FADS6Q8N9I5 356 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 CD300LFQ8TDQ1 290 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 NANOS1Q8WY41 292 aaKnown RBP9.78□□□□□ -0.84
SSU72-202ENST00000359060 PCDHB10Q9UN67 800 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 NCOA6Q14686 2063 aaPredicted RBP9.78□□□□□ -0.84
SSU72-202ENST00000359060 LRP3O75074 770 aa9.78□□□□□ -0.84
SSU72-202ENST00000359060 HPP00738 406 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms