RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 TRGV5A0A0B4J1U4 118 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 MCRIP1C9JLW8 97 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 MPC2O95563 127 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 CSTBP04080 98 aaKnown RBP12.91□□□□□ -0.34
GABPB1-202ENST00000359031 LIPCP11150 499 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 HLA-GP17693 338 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 CXCL2P19875 107 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 ARR3P36575 388 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 PPP1R1AQ13522 171 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 TGIF1Q15583 401 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 LIN54Q6MZP7 749 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 DPPA2Q7Z7J5 298 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 PXT1Q8NFP0 134 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 TERB2Q8NHR7 220 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 MITD1Q8WV92 249 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 WDR89Q96FK6 387 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-202ENST00000359031 PHB2Q99623 299 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 DPCDQ9BVM2 203 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-202ENST00000359031 LDAHQ9H6V9 325 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 ZDHHC11Q9H8X9 412 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 HSF4Q9ULV5 492 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 IGKV1-27A0A075B6S5 117 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 LOC100509620A0A075B734 347 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 C9orf170A2RU37 121 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 RFPL4AA6NLU0 287 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 RFPL4AL1F8VTS6 287 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 HTR3BO95264 441 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 CD8AP01732 235 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 FPR2P25090 351 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 SNU13P55769 128 aaKnown RBP12.91□□□□□ -0.34
GABPB1-202ENST00000359031 FGL1Q08830 312 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 C3AR1Q16581 482 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 PLCXD3Q63HM9 321 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 IGF2-ASQ6U949 168 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 LHFPL1Q86WI0 220 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 MRPS24Q96EL2 167 aaKnown RBP12.91□□□□□ -0.34
GABPB1-202ENST00000359031 WDYHV1Q96HA8 205 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 ZNF552Q9H707 407 aaPredicted RBP12.91□□□□□ -0.34
GABPB1-202ENST00000359031 FN3KRPQ9HA64 309 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 ASCL3Q9NQ33 180 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 PCDHB16Q9NRJ7 776 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 ZNF175Q9Y473 711 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 MED13Q9UHV7 2174 aa12.91□□□□□ -0.34
GABPB1-202ENST00000359031 SERPINA5P05154 406 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 GABRR1P24046 479 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 OR3A3P47888 321 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 OR3A2P47893 321 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 TNFSF10P50591 281 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 IL13RA1P78552 427 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 EXOSC2Q13868 293 aaKnown RBP12.9□□□□□ -0.34
GABPB1-202ENST00000359031 C6orf183Q5T699 404 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 NSUN5P2Q63ZY6 315 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 MOB3CQ70IA8 216 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 TMPRSS7Q7RTY8 843 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 CSNK2A3Q8NEV1 391 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 MARCH1Q8TCQ1 289 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 EMG1Q92979 244 aaKnown RBP12.9□□□□□ -0.34
GABPB1-202ENST00000359031 OPA3Q9H6K4 179 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 SPRR3Q9UBC9 169 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 MAB21L2Q9Y586 359 aa12.9□□□□□ -0.34
GABPB1-202ENST00000359031 GCN1Q92616 2671 aaKnown RBP12.9□□□□□ -0.34
GABPB1-202ENST00000359031 AHCTF1Q8WYP5 2266 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 FXYD6-FXYD2A0A087WZ82 144 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 A0A096LPE4 126 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 A0A1W2PPZ6 126 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 TUBAL3A6NHL2 446 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 FIGNL2A6NMB9 653 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 EFSO43281 561 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 SPRY1O43609 319 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-202ENST00000359031 DUS4LO95620 317 aaKnown RBP12.89□□□□□ -0.35
GABPB1-202ENST00000359031 HLA-HP01893 362 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 PPP3CBP16298 524 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 AGTR1P30556 359 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 CAMK2BQ13554 666 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 C9orf135Q5VTT2 229 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 NUFIP2Q7Z417 695 aaKnown RBP12.89□□□□□ -0.35
GABPB1-202ENST00000359031 PEG10Q86TG7 708 aaKnown RBP12.89□□□□□ -0.35
GABPB1-202ENST00000359031 TMEM185AQ8NFB2 350 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 OR5AP2Q8NGF4 316 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-202ENST00000359031 POM121Q96HA1 1249 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 FXYD6Q9H0Q3 95 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 DEFB127Q9H1M4 99 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 PPA2Q9H2U2 334 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 PLEKHJ1Q9NW61 149 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 EDARQ9UNE0 448 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 GPR132Q9UNW8 380 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 OSGIN2Q9Y236 505 aa12.89□□□□□ -0.35
GABPB1-202ENST00000359031 LINC00862A6NCI5 91 aa12.88□□□□□ -0.35
GABPB1-202ENST00000359031 SLC22A20A6NK97 555 aa12.88□□□□□ -0.35
GABPB1-202ENST00000359031 ARPC5O15511 151 aa12.88□□□□□ -0.35
GABPB1-202ENST00000359031 RRP8O43159 456 aaKnown RBP12.88□□□□□ -0.35
GABPB1-202ENST00000359031 ANGPTL7O43827 346 aa12.88□□□□□ -0.35
GABPB1-202ENST00000359031 NOS1APO75052 506 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-202ENST00000359031 SS18L1O75177 396 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-202ENST00000359031 PRB1P04280 392 aa12.88□□□□□ -0.35
GABPB1-202ENST00000359031 RPA2P15927 270 aa12.88□□□□□ -0.35
GABPB1-202ENST00000359031 S100A11P31949 105 aa12.88□□□□□ -0.35
GABPB1-202ENST00000359031 ECI1P42126 302 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms