RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GNG4P50150 75 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 TMEM267Q0VDI3 215 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-203ENST00000358544 ATP6V1FQ16864 119 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 PPP1R35Q8TAP8 253 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 ABI3Q9P2A4 366 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 SLC17A4Q9Y2C5 497 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 WDR1O75083 606 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 CCSMST1Q4G0I0 132 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 JMJD6Q6NYC1 403 aaPredicted RBP5.46□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF343Q6P1L6 599 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 ZNF880Q6PDB4 577 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 SLC39A11Q8N1S5 342 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 EIF4E3Q8N5X7 224 aaKnown RBP5.46□□□□□ -1.54
VPS13B-203ENST00000358544 OR2A1Q8NGT9 310 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 IGF2RP11717 2491 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 DDX60Q8IY21 1712 aaKnown RBP5.46□□□□□ -1.54
VPS13B-203ENST00000358544 CRISP2P16562 243 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 H2BFWTQ7Z2G1 175 aa5.46□□□□□ -1.54
VPS13B-203ENST00000358544 WNK3Q9BYP7 1800 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PLPP1O14494 284 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 ADAM20O43506 726 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 RCC1P18754 421 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 HOXA6P31267 233 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 VIPR2P41587 438 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PXNP49023 591 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PIGCQ92535 297 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 ADGRG7Q96K78 797 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 OR6C3Q9NZP0 311 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 NTN1O95631 604 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 CT45A10P0DMU9 189 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 TNFSF4P23510 183 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 P2RY1P47900 373 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 WDR38Q5JTN6 314 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 TMEM251Q8N6I4 163 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 RIMS4Q9H426 269 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 HOXB3P14651 431 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 HIST1H1BP16401 226 aaKnown RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 BMP5P22003 454 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PLGLB1Q02325 96 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 VWA1Q6PCB0 445 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 CAMKMTQ7Z624 323 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 TPPP3Q9BW30 176 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 LYRM4Q9HD34 91 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 VDAC3Q9Y277 283 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 VSTM5A8MXK1 200 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 ETHE1O95571 254 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 OR5G3P0C626 314 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 RGPD1P0DJD0 1748 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 RPL18Q07020 188 aaKnown RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 FZD5Q13467 585 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 MORN1Q5T089 497 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PARS2Q7L3T8 475 aaKnown RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 LILRA3Q8N6C8 439 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 OR10P1Q8NGE3 313 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 C19orf43Q9BQ61 176 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 TIMM29Q9BSF4 260 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 CHST6Q9GZX3 395 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 TGM5O43548 720 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 SMAD2Q15796 467 aaKnown RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 HIST3H3Q16695 136 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 Q1RN00 199 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 TAS1R1Q7RTX1 841 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 OTOSQ8NHW6 89 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 S1PR5Q9H228 398 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PRSS37A4D1T9 235 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 MPPED1O15442 326 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 FLT3LGP49771 235 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 OR5B3Q8NH48 314 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 OR5R1Q8NH85 324 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 LRRC3BQ96PB8 259 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 TAF1P21675 1872 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 OPN1LWP04000 364 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 CT45A6P0DMU7 189 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 CT45A5P0DMU8 189 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 CT45A7P0DMV0 189 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 MMP9P14780 707 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 AGERQ15109 404 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 CT45A1Q5HYN5 189 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 EMC4Q5J8M3 183 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 C16orf82Q7Z2V1 217 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 CT45A3Q8NHU0 189 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 ZNRF4Q8WWF5 429 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 ANAPC16Q96DE5 110 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 MARCH5Q9NX47 278 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 SRPK3Q9UPE1 567 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 A0A0A6YYC8 382 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 I3L1I5 382 aaPredicted RBP5.45□□□□□ -1.54
VPS13B-203ENST00000358544 OLFM2O95897 454 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PGA4P0DJD7 388 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PGA5P0DJD9 388 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PVRP15151 417 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 NPPBP16860 134 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 EMDP50402 254 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PNLIPRP2P54317 469 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 SLC37A1P57057 533 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 CCL14Q16627 93 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 PWWP2BQ6NUJ5 590 aa5.45□□□□□ -1.54
VPS13B-203ENST00000358544 DLEC1Q9Y238 1755 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms