RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 OR4E1P0C645 316 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 RPS23P62266 143 aaKnown RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 MRGPRGQ86SM5 289 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 TTC9Q92623 222 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 ASCL3Q9NQ33 180 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 DUSP22Q9NRW4 184 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 LINC00527Q9UJ94 153 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 FAM181BA6NEQ2 426 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 K7ESF4 209 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 FTH1P19P0C7X4 201 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 CHRNA7P36544 502 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 LGALS7P47929 136 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 CDCP2Q5VXM1 449 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 MRM1Q6IN84 353 aaKnown RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF880Q6PDB4 577 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 COMMD1Q8N668 190 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 MYOZ1Q9NP98 299 aaPredicted RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 PARP11Q9NR21 331 aa6.52□□□□□ -1.37
VPS13A-202ENST00000357409 PARP4Q9UKK3 1724 aaKnown RBP6.52□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF701M0R085 212 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-202ENST00000357409 FFAR1O14842 300 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 SULT1A1P50225 295 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 GNG3P63215 75 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 PAX5Q02548 391 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 SOHLH1Q5JUK2 328 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 AP5S1Q9NUS5 200 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 A0A1W2PPQ1 181 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 LIFP15018 202 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 CD226Q15762 336 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF787Q6DD87 383 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 S100A7AQ86SG5 101 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 PRSS35Q8N3Z0 413 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 OR13D1Q8NGV5 346 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 GATA6Q92908 595 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 CMC2Q9NRP2 79 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 DUS4LO95620 317 aaKnown RBP6.51□□□□□ -1.37
VPS13A-202ENST00000357409 HPP00738 406 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ORM1P02763 201 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 RPL12P30050 165 aaKnown RBP6.51□□□□□ -1.37
VPS13A-202ENST00000357409 CDKN1AP38936 164 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 CCR9P51686 369 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 OR1F12Q8NHA8 337 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 NANPQ8TBE9 248 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 SPACA9Q96E40 222 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ADAM29Q9UKF5 820 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 H3BVH4 76 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 CISD3P0C7P0 127 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 HLA-GP17693 338 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ACTBL2Q562R1 376 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 C10orf111Q8N326 155 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 SLC24A4Q8NFF2 622 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 RTN4IP1Q8WWV3 396 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-202ENST00000357409 SYT11Q9BT88 431 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 SIRT3Q9NTG7 399 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-202ENST00000357409 CENPVL1A0A0U1RR11 272 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 LRRC3CA6NJW4 275 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 SYT5O00445 386 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 UBL3O95164 117 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 SRD5A1P18405 259 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ERP29P30040 261 aaKnown RBP6.51□□□□□ -1.37
VPS13A-202ENST00000357409 FAM27E3Q08E93 113 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 VWA1Q6PCB0 445 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ABI3BPQ7Z7G0 1075 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 LHFPL4Q7Z7J7 247 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ADGRG3Q86Y34 549 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 MAPK1IP1LQ8NDC0 245 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 CISD1Q9NZ45 108 aaKnown RBP6.51□□□□□ -1.37
VPS13A-202ENST00000357409 OLFM2O95897 454 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 OR5AL1P0C617 328 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 OR8B3Q8NGG8 313 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 OR8B2Q96RD0 313 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 A0A0A6YYJ9 748 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ANKUB1A6NFN9 424 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 LDLRAD4O15165 306 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 CSF2RBP32927 897 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 GP2P55259 537 aaKnown RBP6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF441Q8N8Z8 693 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 OR6K3Q8NGY3 331 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 FAM222BQ8WU58 562 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 PPP1R1CQ8WVI7 109 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 MT-ATP6P00846 226 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF620Q6ZNG0 422 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 ZNF767PQ75MW2 155 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 GBGT1Q8N5D6 347 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 RNF141Q8WVD5 230 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 TIMP4Q99727 224 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 DTX4Q9Y2E6 619 aa6.51□□□□□ -1.37
VPS13A-202ENST00000357409 LYNX1G3V0Z9 82 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 GNG7O60262 68 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 ADAM11O75078 769 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 LYNX1P0DP58 116 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 NME1P15531 152 aaKnown RBP6.5□□□□□ -1.37
VPS13A-202ENST00000357409 FFAR4Q5NUL3 377 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 NHLRC1Q6VVB1 395 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 C19orf35Q6ZS72 473 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 PECRQ9BY49 303 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 ZFP64Q9NPA5 681 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 VSIG4Q9Y279 399 aa6.5□□□□□ -1.37
VPS13A-202ENST00000357409 LSM2Q9Y333 95 aaKnown RBP6.5□□□□□ -1.37
VPS13A-202ENST00000357409 GPNMBQ14956 572 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms