RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 GNG7O60262 68 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 PJVKQ0ZLH3 352 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 RBFOX1Q9NWB1 397 aaKnown RBP15.51■□□□□ 0.07
COL27A1-201ENST00000356083 A0A1W2PN81 502 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 SEMA7AO75326 666 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 PSMB6P28072 239 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 BRS3P32247 399 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 CHRNA7P36544 502 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 WNT5AP41221 380 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 SMAD4Q13485 552 aaKnown RBP15.51■□□□□ 0.07
COL27A1-201ENST00000356083 SLC39A13Q96H72 371 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 PPP1CAP62136 330 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 SPPL3Q8TCT6 385 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 FGF22Q9HCT0 170 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 EIF4E2O60573 245 aaKnown RBP15.51■□□□□ 0.07
COL27A1-201ENST00000356083 ZNF324O75467 553 aaPredicted RBP15.51■□□□□ 0.07
COL27A1-201ENST00000356083 TMIGD3P0DMS9 266 aaPredicted RBP15.51■□□□□ 0.07
COL27A1-201ENST00000356083 KLF3P57682 345 aaPredicted RBP15.51■□□□□ 0.07
COL27A1-201ENST00000356083 ZNF547Q8IVP9 402 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 LMO3Q8TAP4 145 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 CD22P20273 847 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 ZNF252P-AS1Q0IIN9 211 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 OR8A1Q8NGG7 326 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 RAB1CQ92928 201 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 C19orf43Q9BQ61 176 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 LPAR5Q9H1C0 372 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 ALPLP05186 524 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 RPLP1P05386 114 aaKnown RBP15.51■□□□□ 0.07
COL27A1-201ENST00000356083 SRFP11831 508 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 PFN3P60673 137 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 TOMM20LQ6UXN7 152 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 C16orf52Q8NHV5 167 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 ASB16Q96NS5 453 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 TEAD3Q99594 435 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 ZMIZ1Q9ULJ6 1067 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 NGFP01138 241 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 OR2J1Q9GZK6 312 aa15.51■□□□□ 0.07
COL27A1-201ENST00000356083 TAPBPO15533 448 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 VAMP5O95183 116 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 EMDP50402 254 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 SLC16A12Q6ZSM3 486 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 CD3EP07766 207 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 PPP1CCP36873 323 aaKnown RBP15.5■□□□□ 0.07
COL27A1-201ENST00000356083 CEACAM3P40198 252 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 HERVK_113P61574 105 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 ELFN2Q5R3F8 820 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 ZNF66Q6ZN08 573 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 KLHDC8BQ8IXV7 354 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 TM4SF19Q96DZ7 209 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 FKBP11Q9NYL4 201 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 GSTZ1O43708 216 aaPredicted RBP15.5■□□□□ 0.07
COL27A1-201ENST00000356083 MT-CO3P00414 261 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 SPINK14Q6IE38 97 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 HS3ST2Q9Y278 367 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 MASP2O00187 686 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 ACHEP22303 614 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 LIMK1P53667 647 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 MYPOPQ86VE0 399 aaPredicted RBP15.5■□□□□ 0.07
COL27A1-201ENST00000356083 OR52B4Q8NGK2 314 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 OR52N1Q8NH53 320 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 FAM210BQ96KR6 192 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 SCN11AQ9UI33 1791 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 FGF8P55075 233 aaPredicted RBP15.5■□□□□ 0.07
COL27A1-201ENST00000356083 TIAL1Q01085 375 aaKnown RBP eCLIP15.5■□□□□ 0.072e-7■■■■□ 24.3
COL27A1-201ENST00000356083 PMS2P11Q13670 270 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 ZNF561Q8N587 486 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 RELL2Q8NC24 303 aaPredicted RBP15.5■□□□□ 0.07
COL27A1-201ENST00000356083 GSX1Q9H4S2 264 aaPredicted RBP15.5■□□□□ 0.07
COL27A1-201ENST00000356083 ZNF815PA8K554 130 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 LYRM7Q5U5X0 104 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 ABI3BPQ7Z7G0 1075 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 ARIH2OSQ8N7S6 290 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 GON7Q9BXV9 100 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 FLVCR2Q9UPI3 526 aa15.5■□□□□ 0.07
COL27A1-201ENST00000356083 TMSB15BA0A087X1C1 80 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 A0A1W2PR48 441 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 ROM1Q03395 351 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 GUSBP11Q6P575 273 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 TAAR9Q96RI9 348 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 ZDHHC5Q9C0B5 715 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 ZNF768Q9H5H4 540 aaKnown RBP15.49■□□□□ 0.07
COL27A1-201ENST00000356083 GMPR2Q9P2T1 348 aaKnown RBP15.49■□□□□ 0.07
COL27A1-201ENST00000356083 SPATA31D1Q6ZQQ2 1576 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 MGMTP16455 207 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 TMEM211Q6ICI0 200 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 OR2V1Q8NHB1 315 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 ABHD3Q8WU67 409 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 FAAP24Q9BTP7 215 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 RNF167Q9H6Y7 350 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 PRSS37A4D1T9 235 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 TMEM262E9PQX1 116 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 FZD6O60353 706 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 ARG1P05089 322 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 NPPBP16860 134 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 KCNMB1Q16558 191 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 ACSM5Q6NUN0 579 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 MYOZ3Q8TDC0 251 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 TREX1Q9NSU2 369 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 SLIT3O75094 1523 aa15.49■□□□□ 0.07
COL27A1-201ENST00000356083 LINC01565O15544 149 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms