RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PPIAL4AQ9Y536 164 aa13.07□□□□□ -0.32
TRIM13-201ENST00000356017 NOS1APO75052 506 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 RHBDL1O75783 438 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 MAS1P04201 325 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 MDH2P40926 338 aaKnown RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 PDZK1IP1Q13113 114 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 KCNJ8Q15842 424 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 SLC25A26Q70HW3 274 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 SATL1Q86VE3 508 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 OR52N4Q8NGI2 321 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 SPACA5Q96QH8 159 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 EXOSC4Q9NPD3 245 aaKnown RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 RASL12Q9NYN1 266 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 TRAV38-1A0A0B4J264 116 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 ISPDA4D126 451 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 AKR7A2O43488 359 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 IGHV2-70P01814 119 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 MUC1P15941 1255 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 CALRP27797 417 aaKnown RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 POU3F4P49335 361 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 MICBQ29980 383 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 TMEM155Q4W5P6 130 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 AVPI1Q5T686 147 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 GDPGP1Q6ZNW5 385 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 Q8IYB0 196 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 SAXO1Q8IYX7 474 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 BOLLQ8N9W6 283 aaKnown RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 ZSCAN4Q8NAM6 433 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 POC1AQ8NBT0 407 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 FOXRED1Q96CU9 486 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 REG4Q9BYZ8 158 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 PPIL3Q9H2H8 161 aaKnown RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 METTL17Q9H7H0 456 aaPredicted RBP13.06□□□□□ -0.32
TRIM13-201ENST00000356017 DYSFO75923 2080 aa13.06□□□□□ -0.32
TRIM13-201ENST00000356017 OOEPA6NGQ2 149 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 LGALS8O00214 317 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 NDUFA2O43678 99 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 SYNGR1O43759 233 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 PLATP00750 562 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 PGA5P0DJD9 388 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 USF1P22415 310 aaPredicted RBP13.05□□□□□ -0.32
TRIM13-201ENST00000356017 GLRA1P23415 457 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 PSMD7P51665 324 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 ZMYND11Q15326 602 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 TEX36Q5VZQ5 186 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 SPICQ8N5J4 248 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 OR51F2Q8NH61 342 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 RFT1Q96AA3 541 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 C12orf43Q96C57 262 aaKnown RBP13.05□□□□□ -0.32
TRIM13-201ENST00000356017 CEP19Q96LK0 163 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 RHOFQ9HBH0 211 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 TXNL4BQ9NX01 149 aaKnown RBP13.05□□□□□ -0.32
TRIM13-201ENST00000356017 DNAJB11Q9UBS4 358 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 SCOCQ9UIL1 159 aa13.05□□□□□ -0.32
TRIM13-201ENST00000356017 CCDC168Q8NDH2 2452 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 TANC2Q9HCD6 1990 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 CHD3Q12873 2000 aaKnown RBP13.04□□□□□ -0.32
TRIM13-201ENST00000356017 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 TRAPPC2LH3BP13 241 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 TFAP2AP05549 437 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 HEXAP06865 529 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 TMEM225BP0DP42 221 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 CPT2P23786 658 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 MYL9P24844 172 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 ZP1P60852 638 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 LOXL1Q08397 574 aaPredicted RBP13.04□□□□□ -0.32
TRIM13-201ENST00000356017 GLT8D1Q68CQ7 371 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 SFRP4Q6FHJ7 346 aaPredicted RBP13.04□□□□□ -0.32
TRIM13-201ENST00000356017 C22orf42Q6IC83 251 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 FAM90A1Q86YD7 464 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 JAGN1Q8N5M9 183 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 PXT1Q8NFP0 134 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 OR5D18Q8NGL1 313 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 OR13F1Q8NGS4 319 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 TMIGD2Q96BF3 282 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 S100A13Q99584 98 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 GAL3ST1Q99999 423 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 NRIP2Q9BQI9 281 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 CHCHD6Q9BRQ6 235 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 UQCC2Q9BRT2 126 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 OR51E2Q9H255 320 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 TMEM165Q9HC07 324 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 MTCH1Q9NZJ7 389 aa13.04□□□□□ -0.32
TRIM13-201ENST00000356017 PRRC2AP48634 2157 aaKnown RBP13.04□□□□□ -0.32
TRIM13-201ENST00000356017 RNF223E7ERA6 249 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 C3orf80F5H4A9 247 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 PDCD5O14737 125 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 SPRY1O43609 319 aaPredicted RBP13.03□□□□□ -0.32
TRIM13-201ENST00000356017 NXPH2O95156 264 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 ZNF205O95201 554 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 GADD45AP24522 165 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 RBMXP38159 391 aaKnown RBP13.03□□□□□ -0.32
TRIM13-201ENST00000356017 PTGFRP43088 359 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 RANBP1P43487 201 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 ERVK11-1P61568 191 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 HNRNPA0Q13151 305 aaKnown RBP13.03□□□□□ -0.32
TRIM13-201ENST00000356017 SMIM21Q3B7S5 101 aa13.03□□□□□ -0.32
TRIM13-201ENST00000356017 ZNF404Q494X3 552 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms