RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 TMEM176BQ3YBM2 270 aaPredicted RBP16.6■□□□□ 0.25
PRPF39-201ENST00000355765 TMEM31Q5JXX7 168 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 HIST2H3PS2Q5TEC6 136 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 LFNGQ8NES3 379 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 OR2G3Q8NGZ4 309 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 RBM14Q96PK6 669 aaKnown RBP16.6■□□□□ 0.25
PRPF39-201ENST00000355765 NEU1Q99519 415 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 HIST1H2BLQ99880 126 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 NPIPA1Q9UND3 350 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 KCNIP3Q9Y2W7 256 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 OR5AC1P0C628 307 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 G0S2P27469 103 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 SLC6A8P48029 635 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 ZNF542PQ5EBM4 170 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 ZNF776Q68DI1 518 aaPredicted RBP16.6■□□□□ 0.25
PRPF39-201ENST00000355765 ARHGEF39Q8N4T4 335 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 SHDQ96IW2 340 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 SLC25A31Q9H0C2 315 aa16.6■□□□□ 0.25
PRPF39-201ENST00000355765 ELL3Q9HB65 397 aaPredicted RBP16.6■□□□□ 0.25
PRPF39-201ENST00000355765 NSG1A0A0A6YYJ2 146 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 CRYM-AS1A6NIL9 109 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 GEMIN2O14893 280 aaKnown RBP16.59■□□□□ 0.25
PRPF39-201ENST00000355765 PLRG1O43660 514 aaKnown RBP16.59■□□□□ 0.25
PRPF39-201ENST00000355765 AHSA1O95433 338 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 PGA4P0DJD7 388 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 PGA5P0DJD9 388 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 PIGPP57054 158 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 POU3F1Q03052 451 aaPredicted RBP16.59■□□□□ 0.25
PRPF39-201ENST00000355765 NUP54Q7Z3B4 507 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 DPPA2Q7Z7J5 298 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 OOSP2Q86WS3 158 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 BADQ92934 168 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 PECRQ9BY49 303 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 UNKLQ9H9P5 680 aaKnown RBP16.59■□□□□ 0.25
PRPF39-201ENST00000355765 GPR84Q9NQS5 396 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 ZNF319Q9P2F9 582 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 PADI1Q9ULC6 663 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 PTPRSQ13332 1948 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 A0A087WZY1 265 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 OMGP23515 440 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 SLC37A1P57057 533 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 NFATC4Q14934 902 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 SPSB3Q6PJ21 355 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 C17orf78Q8N4C9 275 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 NAXEQ8NCW5 288 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 ZNF248Q8NDW4 579 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 TMEM68Q96MH6 324 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 NUDT22Q9BRQ3 303 aa16.59■□□□□ 0.25
PRPF39-201ENST00000355765 MCTS1Q9ULC4 181 aaKnown RBP16.59■□□□□ 0.25
PRPF39-201ENST00000355765 JMJD7P0C870 316 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 OR5H8P0DN80 308 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 IL12BP29460 328 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 DEGS2Q6QHC5 323 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 C6orf201Q7Z4U5 140 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 TMEM106CQ9BVX2 250 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 TBL1XR1Q9BZK7 514 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 VN1R1Q9GZP7 353 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 LIME1Q9H400 295 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 IL23AQ9NPF7 189 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 FOXD3Q9UJU5 478 aaPredicted RBP16.58■□□□□ 0.25
PRPF39-201ENST00000355765 POLR1DQ9Y2S0 133 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 B3GALT1Q9Y5Z6 326 aa16.58■□□□□ 0.25
PRPF39-201ENST00000355765 RP1P56715 2156 aa16.58■□□□□ 0.24
PRPF39-201ENST00000355765 MYO15AQ9UKN7 3530 aa16.58■□□□□ 0.24
PRPF39-201ENST00000355765 CELA2BP08218 269 aaPredicted RBP16.58■□□□□ 0.24
PRPF39-201ENST00000355765 FXYD4P59646 89 aa16.58■□□□□ 0.24
PRPF39-201ENST00000355765 PRTGQ2VWP7 1150 aa16.58■□□□□ 0.24
PRPF39-201ENST00000355765 PHLDA2Q53GA4 152 aa16.58■□□□□ 0.24
PRPF39-201ENST00000355765 FBXW12Q6X9E4 464 aa16.58■□□□□ 0.24
PRPF39-201ENST00000355765 ASB10Q8WXI3 467 aa16.58■□□□□ 0.24
PRPF39-201ENST00000355765 FAM210BQ96KR6 192 aa16.58■□□□□ 0.24
PRPF39-201ENST00000355765 AK3Q9UIJ7 227 aa16.58■□□□□ 0.24
PRPF39-201ENST00000355765 NPIPB7O75200 414 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 PGCP20142 388 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 APLNRP35414 380 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 OGFOD3Q6PK18 319 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 DNM1P34Q6PK57 102 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 CPEB2Q7Z5Q1 589 aaKnown RBP16.57■□□□□ 0.24
PRPF39-201ENST00000355765 PTPMT1Q8WUK0 201 aaPredicted RBP16.57■□□□□ 0.24
PRPF39-201ENST00000355765 TVP23CQ96ET8 276 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 NIPSNAP3BQ9BS92 247 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 F5P12259 2224 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 MS4A18H0YCH9 400 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 EREGO14944 169 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 CYTIPO60759 359 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 ATP6V0CP27449 155 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 GLIPR1P48060 266 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 NOVA1P51513 510 aaKnown RBP16.57■□□□□ 0.24
PRPF39-201ENST00000355765 MS4A18Q3C1V0 323 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 OR8B12Q8NGG6 310 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 M1APQ8TC57 530 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 DUSP15Q9H1R2 295 aaPredicted RBP16.57■□□□□ 0.24
PRPF39-201ENST00000355765 CYP8B1Q9UNU6 501 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 CEP290O15078 2479 aa16.57■□□□□ 0.24
PRPF39-201ENST00000355765 CNTRLQ7Z7A1 2325 aa16.56■□□□□ 0.24
PRPF39-201ENST00000355765 A0A087WWC5 75 aa16.56■□□□□ 0.24
PRPF39-201ENST00000355765 IGKV1-9A0A0C4DH69 117 aa16.56■□□□□ 0.24
PRPF39-201ENST00000355765 CTSDP07339 412 aaPredicted RBP16.56■□□□□ 0.24
PRPF39-201ENST00000355765 TMEM225BP0DP42 221 aa16.56■□□□□ 0.24
PRPF39-201ENST00000355765 EN2P19622 333 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms