RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CAPZBP47756 277 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SRSF9Q13242 221 aaKnown RBP eCLIP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TCTN1Q2MV58 587 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 ING1Q9UK53 422 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 KCPQ6ZWJ8 1503 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SPTBN2O15020 2390 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 M0R143 59 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 KLF3P57682 345 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 MYOZ3Q8TDC0 251 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SPSB1Q96BD6 273 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 WDR89Q96FK6 387 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 LINC01553A4QN01 128 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 FABP5Q01469 135 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SLC38A11Q08AI6 406 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 RPEL1Q2QD12 228 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 XKR7Q5GH72 579 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 PELI3Q8N2H9 469 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 FOXJ3Q9UPW0 622 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 PHRF1Q9P1Y6 1649 aaKnown RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 PNLIPRP2P54317 469 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 IZUMO4Q1ZYL8 232 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 GSG1Q2KHT4 349 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TMEM128Q5BJH2 165 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 AFMIDQ63HM1 303 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 ALKAL1Q6UXT8 129 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 LINC01387J3KSC0 135 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 STAC2Q6ZMT1 411 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 UBE2L6O14933 153 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 MELTFP08582 738 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 BRS3P32247 399 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SUMO3P55854 103 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 C19orf57Q0VDD7 668 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 RTP5Q14D33 572 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TOMM34Q15785 309 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 ETV3LQ6ZN32 361 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 OR1L3Q8NH93 324 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 MAFAQ8NHW3 353 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 GPR87Q9BY21 358 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TRAV38-1A0A0B4J264 116 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 ZAR1LA6NP61 321 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 KLKB1P03952 638 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 OR4A8P0C604 315 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SSBP1Q04837 148 aaKnown RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 FAM53BQ14153 422 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TCTN3Q6NUS6 607 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 C20orf27Q9GZN8 174 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 FADS6Q8N9I5 356 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 OR52B4Q8NGK2 314 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 MRGPRX1Q96LB2 322 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 RAB40CQ96S21 281 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 PSG11Q9UQ72 335 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 ARFGEF2Q9Y6D5 1785 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 RHBDL1O75783 438 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SFTA3P0C7M3 94 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SRFP11831 508 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TNFAIP6P98066 277 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TMEM241Q24JQ0 296 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 VIRMAQ69YN4 1812 aaKnown RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 PRKNO60260 465 aaPredicted RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 RASL11BQ9BPW5 248 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 CAMPP49913 170 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 GUK1Q16774 197 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SRD5A3Q9H8P0 318 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 MMP26Q9NRE1 261 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 F2RL2O00254 374 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SEMA7AO75326 666 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 CGB2Q6NT52 195 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 PAQR6Q6TCH4 344 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 MRGPREQ86SM8 312 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 WFDC3Q8IUB2 231 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 LIMK1P53667 647 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ZNF547Q8IVP9 402 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 TEX261Q6UWH6 196 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 OR10D4PQ8NGN7 298 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ZNF426Q9BUY5 554 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 LRP12Q9Y561 859 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SCN2AQ99250 2005 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 JUNBP17275 347 aaPredicted RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 CA6P23280 308 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 FPR2P25090 351 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 PET117Q6UWS5 81 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 TM4SF19Q96DZ7 209 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SPACA9Q96E40 222 aaPredicted RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 MOGAT1Q96PD6 335 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ABCA4P78363 2273 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 TIPARPQ7Z3E1 657 aaKnown RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 LRP11Q86VZ4 500 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 GNRHR2Q96P88 292 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 OR6C3Q9NZP0 311 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 B9D1Q9UPM9 204 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 TMPRSS2O15393 492 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 C19orf54Q5BKX5 351 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 C11orf87Q6NUJ2 197 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 LINC00052Q96N35 136 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 TREM2Q9NZC2 230 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SHISA8B8ZZ34 492 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 MYF5P13349 255 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 CEACAM3P40198 252 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SLC6A12P48065 614 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms