RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 RIIAD1A6NNX1 92 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 A8MV72 311 aaPredicted RBP1.96□□□□□ -2.1
VPS54-202ENST00000354504 PROB1E7EW31 1015 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 TNFSF11O14788 317 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 RRP8O43159 456 aaKnown RBP1.96□□□□□ -2.1
VPS54-202ENST00000354504 LRP3O75074 770 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 TNFSF13O75888 250 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 FAM157CP0CG43 387 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ABOP16442 354 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ACHEP22303 614 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 MYL9P24844 172 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 AZGP1P25311 298 aaKnown RBP1.96□□□□□ -2.1
VPS54-202ENST00000354504 HSD11B1P28845 292 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 SRD5A2P31213 254 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 OR3A4PP47883 348 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 UCP2P55851 309 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 BIDP55957 195 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 OR2B6P58173 313 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 MRPS34P82930 218 aaKnown RBP1.96□□□□□ -2.1
VPS54-202ENST00000354504 PSG4Q00888 419 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 OR7A5Q15622 319 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 MRGPRG-AS1Q2M3A8 158 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ATPAF1Q5TC12 328 aaPredicted RBP1.96□□□□□ -2.1
VPS54-202ENST00000354504 Q6ZWC4 215 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 RAB11FIP2Q7L804 512 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 NOXA1Q86UR1 476 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 HOGA1Q86XE5 327 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 CALHM1Q8IU99 346 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 SKA3Q8IX90 412 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 GVQW1Q8N7I0 195 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 SAMD12Q8N8I0 201 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 POC5Q8NA72 575 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ADAD2Q8NCV1 583 aaKnown RBP1.96□□□□□ -2.1
VPS54-202ENST00000354504 OR2M7Q8NG81 312 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 OR5AK2Q8NH90 309 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ASB17Q8WXJ9 295 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ITFG2Q969R8 447 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 TMEM106AQ96A25 262 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 PNPLA2Q96AD5 504 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 POM121L2Q96KW2 1035 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ART5Q96L15 291 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ADAD1Q96M93 576 aaKnown RBP1.96□□□□□ -2.1
VPS54-202ENST00000354504 TAAR6Q96RI8 345 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 SF3B5Q9BWJ5 86 aaKnown RBP1.96□□□□□ -2.1
VPS54-202ENST00000354504 FXYD6Q9H0Q3 95 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ARV1Q9H2C2 271 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ARRDC1-AS1Q9H2J1 176 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ZNF160Q9HCG1 818 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 TMEM38BQ9NVV0 291 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 MCUBQ9NWR8 336 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 CHCHD3Q9NX63 227 aaKnown RBP1.96□□□□□ -2.1
VPS54-202ENST00000354504 GLTPQ9NZD2 209 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 OR52A1Q9UKL2 312 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 VDAC3Q9Y277 283 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ARFGEF3Q5TH69 2177 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ATRXP46100 2492 aa1.96□□□□□ -2.1
VPS54-202ENST00000354504 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.95□□□□□ -2.1
VPS54-202ENST00000354504 SOCS1O15524 211 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 ZNHIT1O43257 154 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 ARHGEF9O43307 516 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 NOL3O60936 208 aaKnown RBP1.95□□□□□ -2.1
VPS54-202ENST00000354504 CA11O75493 328 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 ZFAND5O76080 213 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 NUDT14O95848 222 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 NAPSAO96009 420 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 IGLV1-44P01699 117 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 TPOP07202 933 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 CST2P09228 141 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 HPGDP15428 266 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 MDKP21741 143 aaPredicted RBP1.95□□□□□ -2.1
VPS54-202ENST00000354504 POU3F4P49335 361 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 EMP2P54851 167 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 SSBP1Q04837 148 aaKnown RBP1.95□□□□□ -2.1
VPS54-202ENST00000354504 GK2Q14410 553 aaPredicted RBP1.95□□□□□ -2.1
VPS54-202ENST00000354504 ZNHIT3Q15649 155 aaPredicted RBP1.95□□□□□ -2.1
VPS54-202ENST00000354504 ODF3L2Q3SX64 289 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 HSD17B12Q53GQ0 312 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 RIPPLY2Q5TAB7 128 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 GLT8D1Q68CQ7 371 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 SPINK14Q6IE38 97 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 Q6P435 159 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 ACSM6Q6P461 480 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 MUC20Q8N307 709 aaPredicted RBP1.95□□□□□ -2.1
VPS54-202ENST00000354504 C10orf53Q8N6V4 93 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 WDR31Q8NA23 367 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 TMEM229BQ8NBD8 167 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 OR51D1Q8NGF3 324 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 OR52L1Q8NGH7 329 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 OR13G1Q8NGZ3 307 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 FAM110DQ8TAY7 271 aaPredicted RBP1.95□□□□□ -2.1
VPS54-202ENST00000354504 NAT6Q93015 286 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 ABTB1Q969K4 478 aaPredicted RBP1.95□□□□□ -2.1
VPS54-202ENST00000354504 DIRAS2Q96HU8 199 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 ZFP3Q96NJ6 502 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 YPEL4Q96NS1 127 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 GAL3ST4Q96RP7 486 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 PRRX2Q99811 253 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 UQCC2Q9BRT2 126 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 TTTY12Q9BZ98 90 aa1.95□□□□□ -2.1
VPS54-202ENST00000354504 CHST5Q9GZS9 411 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms