RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 GUSBP08236 651 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 OR5H8P0DN80 308 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 CFPP27918 469 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 WNT5AP41221 380 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 EGR4Q05215 589 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 RNF151Q2KHN1 245 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 KLHL24Q6TFL4 600 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 NPSR1Q6W5P4 371 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 RNF208Q9H0X6 261 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 FGF22Q9HCT0 170 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 GDE1Q9NZC3 331 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 THAP10Q9P2Z0 257 aaPredicted RBP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 B3GALT5Q9Y2C3 310 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 ZNF407Q9C0G0 2248 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 COL4A2P08572 1712 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 TCF21O43680 179 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 MELTFP08582 738 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 TMEM225BP0DP42 221 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 MRPS34P82930 218 aaKnown RBP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 SSBP1Q04837 148 aaKnown RBP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 SLC10A1Q14973 349 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 ZNF66Q6ZN08 573 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 OR52M1Q8NGK5 317 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 C16orf52Q8NHV5 167 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 AURKAIP1Q9NWT8 199 aaPredicted RBP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 XKRY2A2RUG3 117 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 SCDO00767 359 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 TAAR5O14804 337 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 HNRNPA1P09651 372 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 GZMBP10144 247 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 HLA-GP17693 338 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 IL11P20809 199 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 ZNF10P21506 573 aaPredicted RBP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 SLC25A1P53007 311 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 CST6Q15828 149 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 ADIRFQ15847 76 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 TEX30Q5JUR7 227 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 SPRED2Q7Z698 418 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 MYPOPQ86VE0 399 aaPredicted RBP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 MAML2Q8IZL2 1156 aaPredicted RBP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 C5orf34Q96MH7 638 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 SLC25A31Q9H0C2 315 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 RIMS4Q9H426 269 aaPredicted RBP13.38□□□□□ -0.27
PTBP1-201ENST00000349038 PPIAL4AQ9Y536 164 aa13.38□□□□□ -0.27
PTBP1-201ENST00000349038 TRBV6-7A0A0A0MS04 114 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 A0A1W2PPQ1 181 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 MEGF11A6BM72 1044 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 A8MWP6 167 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 TNFSF14O43557 240 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 CD55P08174 381 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 APOBEC1P41238 236 aaKnown RBP13.37□□□□□ -0.27
PTBP1-201ENST00000349038 RAB1AP62820 205 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 INSM1Q01101 510 aaPredicted RBP13.37□□□□□ -0.27
PTBP1-201ENST00000349038 C6orf201Q7Z4U5 140 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 BCORP1Q8N888 145 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 THAP3Q8WTV1 239 aaPredicted RBP13.37□□□□□ -0.27
PTBP1-201ENST00000349038 DEFB118Q96PH6 123 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 C1orf123Q9NWV4 160 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 TGOLN2O43493 480 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 DANCRP0C864 163 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 PIGPP57054 158 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 SRSF4Q08170 494 aaKnown RBP13.37□□□□□ -0.27
PTBP1-201ENST00000349038 TRA2AQ13595 282 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTBP1-201ENST00000349038 LRRC18Q8N456 261 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 TUBG2Q9NRH3 451 aa13.37□□□□□ -0.27
PTBP1-201ENST00000349038 IGKV1D-8A0A087WSZ0 117 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 CCDC187A0A096LP49 1063 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 A0A1B0GUS0 222 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 A0A1B0GWJ7 208 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 H3BML4 177 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 MASP2O00187 686 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 GPR137BO60478 399 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 OR5AC1P0C628 307 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 BMP5P22003 454 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 SLC6A9P48067 706 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 GLO1Q04760 184 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 P2RY6Q15077 328 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 PRSS8Q16651 343 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 TMEM176BQ3YBM2 270 aaPredicted RBP13.36□□□□□ -0.27
PTBP1-201ENST00000349038 C2orf27AQ580R0 203 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 C1orf87Q8N0U7 546 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 C12orf76Q8N812 135 aaPredicted RBP13.36□□□□□ -0.27
PTBP1-201ENST00000349038 ZNF321PQ8N8H1 164 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 C2orf88Q9BSF0 95 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 TWSG1Q9GZX9 223 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 MSL2Q9HCI7 577 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 A0A0A6YYD4 124 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 A0A0U1RQK1 487 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 TRAPPC6AO75865 159 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 RAB38P57729 211 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 ZNF141Q15928 474 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 FAM166AQ6J272 317 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 C5orf24Q7Z6I8 188 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 SLC22A24Q8N4F4 322 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 DAZLQ92904 295 aaKnown RBP13.36□□□□□ -0.27
PTBP1-201ENST00000349038 CCDC74BQ96LY2 380 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 HEATR1Q9H583 2144 aaKnown RBP13.36□□□□□ -0.27
PTBP1-201ENST00000349038 PCNX3Q9H6A9 2034 aa13.36□□□□□ -0.27
PTBP1-201ENST00000349038 PTPRSQ13332 1948 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms