RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ISG15P05161 165 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 NDUFB7P17568 137 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 MYL12AP19105 171 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 PRKACBP22694 351 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 ATP1B3P54709 279 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 ACTG1P63261 375 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 IL18R1Q13478 541 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 ALKBH1Q13686 389 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 BLMHQ13867 455 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 FIP1L1Q6UN15 594 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 PRSS35Q8N3Z0 413 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 FAM216BQ8N7L0 139 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 NPRL2Q8WTW4 380 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 SEH1LQ96EE3 360 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 PKIBQ9C010 78 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 CHST5Q9GZS9 411 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 DCLRE1BQ9H816 532 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 MRPS18AQ9NVS2 196 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 ZNF69Q9UC07 566 aa13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 RPUSD1Q9UJJ7 312 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-201ENST00000346501 COL6A5A8TX70 2615 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 A0A1W2PPH5 198 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 A0A1W2PQ09 198 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 TMEM212A6NML5 194 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 SIGLEC5O15389 551 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 VENTXO95231 258 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 IGHA1P01876 353 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 ACAA1P09110 424 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 DCKP27707 260 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 PEX2P28328 305 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 KIR3DL2P43630 455 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 TGM4P49221 684 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 RBP2P50120 134 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 CAV3P56539 151 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 SRSF2Q01130 221 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 IL24Q13007 206 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 ZNF691Q5VV52 312 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 ZNF788Q6ZQV5 615 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 TMEM185AQ8NFB2 350 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 OR13C3Q8NGS6 347 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 ANGPTL6Q8NI99 470 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 ZDHHC16Q969W1 377 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 DACT3Q96B18 629 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 PELI1Q96FA3 418 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 WDFY2Q96P53 400 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 FGF23Q9GZV9 251 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 ZMAT3Q9HA38 289 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 ERVK13-1Q9NX77 482 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 FRRS1LQ9P0K9 344 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 ONECUT1Q9UBC0 465 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 MYRFQ9Y2G1 1151 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 KPTNQ9Y664 436 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 HSPE1-MOB4S4R3N1 261 aa13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 ANK3Q12955 4377 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-201ENST00000346501 NOS1APO75052 506 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 PGA5P0DJD9 388 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 PSG2P11465 335 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 ARF6P62330 175 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 KLF17Q5JT82 389 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 ACP7Q6ZNF0 438 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 MKXQ8IYA7 352 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 Q8IYB0 196 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 RDH10Q8IZV5 341 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 C8orf59Q8N0T1 100 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 ZNF561Q8N587 486 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 DNAAF1Q8NEP3 725 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 OR52I1Q8NGK6 324 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 OR5AK2Q8NH90 309 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 GATAD2BQ8WXI9 593 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 SPSB1Q96BD6 273 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 FGGYQ96C11 551 aa13.06□□□□□ -0.32
TSPAN4-201ENST00000346501 IGHV3OR16-10A0A075B7F0 116 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 RFPL4AA6NLU0 287 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 ANKRD65E5RJM6 399 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 RFPL4AL1F8VTS6 287 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 SYNGR1O43759 233 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 IGHV4-38-2P0DP08 117 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 MPZP25189 248 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 MTCP1P56278 107 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 BAMBIQ13145 260 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 UBE2V2Q15819 145 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 LHFPL2Q6ZUX7 228 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 UTS2BQ765I0 119 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 ANGPTL5Q86XS5 388 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 KIR3DL3Q8N743 410 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 SIGLECL1Q8N7X8 197 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 TBC1D15Q8TC07 691 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 FAM216AQ8WUB2 273 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 CPNE2Q96FN4 548 aaPredicted RBP13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 CEP19Q96LK0 163 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 GAFA1Q96PS6 74 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 DCTN5Q9BTE1 182 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 FGF20Q9NP95 211 aaPredicted RBP13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 GLS2Q9UI32 602 aa13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 CAB39Q9Y376 341 aaPredicted RBP13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 EXOSC1Q9Y3B2 195 aaKnown RBP13.05□□□□□ -0.32
TSPAN4-201ENST00000346501 TRBV23-1A0A0A0MS06 115 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 TRBV2A0A0J9YWF9 115 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 hCG_1809904A0A1W2PP81 198 aa13.04□□□□□ -0.32
TSPAN4-201ENST00000346501 A0A1W2PPE2 198 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms