RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 HTR3DQ70Z44 454 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 OR52N4Q8NGI2 321 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 LCORQ96JN0 433 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 DECR2Q9NUI1 292 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 OPN4Q9UHM6 478 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 ACACBO00763 2458 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 MYBPHLA2RUH7 354 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 HTR5AP47898 357 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 GGTA1PQ4G0N0 100 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 PYCR3Q53H96 274 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 PRRT3Q5FWE3 981 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 FAAP20Q6NZ36 180 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 OR4C13Q8NGP0 309 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 OR4S2Q8NH73 311 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 APIPQ96GX9 242 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 RTP3Q9BQQ7 232 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SLC25A33Q9BSK2 321 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 C5AR2Q9P296 337 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 FAM221AA4D161 298 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 C1QTNF9BB2RNN3 333 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 CST3P01034 146 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 MYOGP15173 224 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SOWAHAQ2M3V2 549 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 FAM71CQ8NEG0 241 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 MRAP2Q96G30 205 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SPATA6Q9NWH7 488 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 VAX2Q9UIW0 290 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 PLIN4Q96Q06 1357 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SPATA31A5Q5VU36 1347 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SPATA31A7Q8IWB4 1347 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 C7orf77A4D0Y5 90 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SPINK4O60575 86 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 GPR3P46089 330 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SURF2Q15527 256 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 PRICKLE4Q2TBC4 344 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 ANKRD55Q3KP44 614 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 CGB2Q6NT52 195 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 DOK3Q7L591 496 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 MRPL52Q86TS9 123 aaKnown RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 EDARADDQ8WWZ3 215 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 GALMQ96C23 342 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 C12orf42Q96LP6 360 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 NTPCRQ9BSD7 190 aaKnown RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 C1QTNF3Q9BXJ4 246 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 STRADBQ9C0K7 418 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 RNF167Q9H6Y7 350 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 PARP11Q9NR21 331 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SPANXCQ9NY87 97 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 TMEM184BQ9Y519 407 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 TRBV23OR9-2A0A075B6M9 112 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SH2D1BO14796 132 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 TIMM8AO60220 97 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 IER3P46695 156 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 FGF8P55075 233 aaPredicted RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 TXNRD3NBQ6F5E7 133 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 MRPL54Q6P161 138 aaKnown RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 MOB3CQ70IA8 216 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 OR8I2Q8N0Y5 310 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 RNF175Q8N4F7 328 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 NMNAT3Q96T66 252 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 ARHGAP9Q9BRR9 750 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 MBNL1Q9NR56 388 aaKnown RBP5.58□□□□□ -1.52
VCAN-203ENST00000343200 OR5AC2Q9NZP5 309 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 FAM198AQ9UFP1 575 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 USP22Q9UPT9 525 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 HS3ST1O14792 307 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 PTP4A3O75365 173 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 CXorf1O96002 111 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 HLA-DRB1P01911 266 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 CPMP14384 443 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 Q6ZVU0 165 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 DCAF4L2Q8NA75 395 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 TCTN2Q96GX1 697 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 RNF181Q9P0P0 153 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 SLC17A4Q9Y2C5 497 aa5.58□□□□□ -1.52
VCAN-203ENST00000343200 A0A0D9SEW6 157 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 PEX10O60683 326 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FTH1P19P0C7X4 201 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 PRF1P14222 555 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 CD40P25942 277 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FLT3LGP49771 235 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FABP5Q01469 135 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 C18orf21Q32NC0 220 aaPredicted RBP5.57□□□□□ -1.52
VCAN-203ENST00000343200 VASH2Q86V25 355 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FADS6Q8N9I5 356 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 AUNIPQ9H7T9 357 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 TAS2R4Q9NYW5 299 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 OR2T8A6NH00 312 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 GFRA2O00451 464 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 ZNF749O43361 778 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 HBQ1P09105 142 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 IAPPP10997 89 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 SELEP16581 610 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 FAHP16930 419 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 ACP1P24666 158 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 LBX1P52954 281 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 SMIM21Q3B7S5 101 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 C16orf82Q7Z2V1 217 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 MOGAT3Q86VF5 341 aa5.57□□□□□ -1.52
VCAN-203ENST00000343200 PUSL1Q8N0Z8 303 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms