RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 MAFIPQ8WZ33 124 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 VRK1Q99986 396 aaPredicted RBP13.06□□□□□ -0.32
TPM3-208ENST00000341485 ST6GALNAC5Q9BVH7 336 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 CRLF2Q9HC73 371 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 GPR173Q9NS66 373 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 EEF1E1-BLOC1S5C9J1V9 151 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 CST2P09228 141 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 LHX2P50458 406 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 ARPC4P59998 168 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 ABLIM2Q6H8Q1 611 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 RELL2Q8NC24 303 aaPredicted RBP13.06□□□□□ -0.32
TPM3-208ENST00000341485 TMEM185AQ8NFB2 350 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 OR2AE1Q8NHA4 323 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 ZNF845Q96IR2 970 aaPredicted RBP13.06□□□□□ -0.32
TPM3-208ENST00000341485 DEFB127Q9H1M4 99 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 TMEM38BQ9NVV0 291 aa13.06□□□□□ -0.32
TPM3-208ENST00000341485 FREM2Q5SZK8 3169 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 BCL2L11O43521 198 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 SERPINF1P36955 418 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 SNU13P55769 128 aaKnown RBP13.05□□□□□ -0.32
TPM3-208ENST00000341485 TMEM128Q5BJH2 165 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 BEX5Q5H9J7 111 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 DRAM2Q6UX65 266 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 AAED1Q7RTV5 226 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 PEG10Q86TG7 708 aaKnown RBP13.05□□□□□ -0.32
TPM3-208ENST00000341485 LHFPL1Q86WI0 220 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 PDZD9Q8IXQ8 264 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 OR52H1Q8NGJ2 320 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 OR1F12Q8NHA8 337 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 LINC00052Q96N35 136 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 ALKBH3Q96Q83 286 aaPredicted RBP13.05□□□□□ -0.32
TPM3-208ENST00000341485 ELL3Q9HB65 397 aaPredicted RBP13.05□□□□□ -0.32
TPM3-208ENST00000341485 ACKR4Q9NPB9 350 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 PFDN2Q9UHV9 154 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 OSGIN2Q9Y236 505 aa13.05□□□□□ -0.32
TPM3-208ENST00000341485 TRAV17A0A0B4J275 112 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 TEX46H3BTG2 121 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 CEACAM4O75871 244 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 SYNGR4O95473 234 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 SFT2D2O95562 160 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 PATE4P0C8F1 98 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 B4GALT1P15291 398 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 PI3P19957 117 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 ZP3P21754 424 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 FPR2P25090 351 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 CLDN18P56856 261 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 AADACL3Q5VUY0 350 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 ACOT7LQ6ZUV0 252 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 CSNK2A3Q8NEV1 391 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 SEMA6DQ8NFY4 1073 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 CPT1CQ8TCG5 803 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 REEP6Q96HR9 211 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 S100A13Q99584 98 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 RTBDNQ9BSG5 229 aaPredicted RBP13.04□□□□□ -0.32
TPM3-208ENST00000341485 MBD2Q9UBB5 411 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 PTPRZ1P23471 2315 aaPredicted RBP13.04□□□□□ -0.32
TPM3-208ENST00000341485 CEP250Q9BV73 2442 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 KANTRA0A1W2PQU2 76 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 C5orf51A6NDU8 294 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 SDCBPO00560 298 aaPredicted RBP13.04□□□□□ -0.32
TPM3-208ENST00000341485 ACTL6AO96019 429 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 CRHP06850 196 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 ZNF708P17019 499 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 ZNF32P17041 273 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 M6PRP20645 277 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 CPT2P23786 658 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 OR3A2P47893 321 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 LUMP51884 338 aaPredicted RBP13.04□□□□□ -0.32
TPM3-208ENST00000341485 PMP22Q01453 160 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 BAMBIQ13145 260 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 SLC9A3R2Q15599 337 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 KRTAP27-1Q3LI81 207 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 AKR7LQ8NHP1 331 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 THAP6Q8TBB0 222 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 LIPGQ9Y5X9 500 aa13.04□□□□□ -0.32
TPM3-208ENST00000341485 TRGV5A0A0B4J1U4 118 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 C13orf42A0A1B0GVH6 325 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 OR6C6A6NF89 314 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 A8MXK9 166 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 CYTIPO60759 359 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 HTR3BO95264 441 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 PRSS12P56730 875 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 TAS2R46P59540 309 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 SUPT4H1P63272 117 aaKnown RBP13.03□□□□□ -0.32
TPM3-208ENST00000341485 FAM74A1Q5RGS3 127 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 CLEC18BQ6UXF7 455 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.03□□□□□ -0.32
TPM3-208ENST00000341485 ZADH2Q8N4Q0 377 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 Q96M66 194 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 ZNF75AQ96N20 296 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 SLC25A32Q9H2D1 315 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 PRR13Q9NZ81 148 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 EHFQ9NZC4 300 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 MCTS1Q9ULC4 181 aaKnown RBP13.03□□□□□ -0.32
TPM3-208ENST00000341485 CUL9Q8IWT3 2517 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 DHRS7CA6NNS2 312 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 CA11O75493 328 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 FGF2P09038 288 aa13.03□□□□□ -0.32
TPM3-208ENST00000341485 GABRR1P24046 479 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms