RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 IGHV3-43A0A0B4J1X8 118 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 GYPAP02724 150 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 IGHV3-43DP0DP04 118 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 TESK1Q15569 626 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 ITLN1Q8WWA0 313 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 PRO3102Q9H379 93 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 TUBD1Q9UJT1 453 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 A0A1B0GV50 99 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 TPPPO94811 219 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 CLEC2LP0C7M8 214 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 ZNF616Q08AN1 781 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 TMEM230Q96A57 120 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 ORAI1Q96D31 301 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 LPAR3Q9UBY5 353 aa11.23□□□□□ -0.61
LIN54-201ENST00000340417 ACACAQ13085 2346 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 ZNF354AO60765 605 aaPredicted RBP11.22□□□□□ -0.61
LIN54-201ENST00000340417 TUBG1P23258 451 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 FCGR2CP31995 323 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 NR4A2P43354 598 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 BAXQ07812 192 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 C9orf106Q8NAJ2 232 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 ST6GALNAC3Q8NDV1 305 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 CORO2AQ92828 525 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 WDYHV1Q96HA8 205 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 TUBG2Q9NRH3 451 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 PURGQ9UJV8 347 aaKnown RBP11.22□□□□□ -0.61
LIN54-201ENST00000340417 TMEM235A6NFC5 223 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 C17orf112F2Z3M2 114 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 ALOX5APP20292 161 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 CAMLGP49069 296 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 RBMS2Q15434 407 aaKnown RBP11.22□□□□□ -0.61
LIN54-201ENST00000340417 GABRA6Q16445 453 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 LGI3Q8N145 548 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 OR10R2Q8NGX6 335 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 SULT4A1Q9BR01 284 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 MTCL1Q9Y4B5 1905 aaKnown RBP11.22□□□□□ -0.61
LIN54-201ENST00000340417 PRAF2O60831 178 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 IGHV3-13P01766 116 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 IGHV3-7P01780 117 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 CEACAM6P40199 344 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 LYPD4Q6UWN0 246 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 ZFP62Q8NB50 900 aaPredicted RBP11.22□□□□□ -0.61
LIN54-201ENST00000340417 BORCS7Q96B45 105 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 CHD5Q8TDI0 1954 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 ZNF708P17019 499 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 CALCRP30988 508 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 TNFSF8P32971 234 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 MGAT2Q10469 447 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 NFAM1Q8NET5 270 aaPredicted RBP11.22□□□□□ -0.61
LIN54-201ENST00000340417 PSG11Q9UQ72 335 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 GREB1Q4ZG55 1949 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 KCNJ3P48549 501 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 SEH1LQ96EE3 360 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 DUS3LQ96G46 650 aaKnown RBP11.22□□□□□ -0.61
LIN54-201ENST00000340417 SUCNR1Q9BXA5 334 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 ADGRL4Q9HBW9 690 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 SLC17A5Q9NRA2 495 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 STARD10Q9Y365 291 aa11.22□□□□□ -0.61
LIN54-201ENST00000340417 J3QT63 122 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 DXOO77932 396 aaKnown RBP11.21□□□□□ -0.61
LIN54-201ENST00000340417 LY86O95711 162 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 BSPH1Q075Z2 132 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 FAM209AQ5JX71 171 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 PIP4P1Q86T03 277 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 PHC2Q8IXK0 858 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 HPSE2Q8WWQ2 592 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 PLCXD1Q9NUJ7 323 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 IFNA7P01567 189 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 ARL3P36405 182 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 PEAR1Q5VY43 1037 aaPredicted RBP11.21□□□□□ -0.61
LIN54-201ENST00000340417 ZNF554Q86TJ5 538 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 ARHGEF39Q8N4T4 335 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 NMNAT2Q9BZQ4 307 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 GOSR1O95249 250 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 ARG1P05089 322 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 ERVFRD-1P60508 538 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 HBG1P69891 147 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 HBG2P69892 147 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 ATPAF1Q5TC12 328 aaPredicted RBP11.21□□□□□ -0.61
LIN54-201ENST00000340417 DCAF12L2Q5VW00 463 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 CD300LDQ6UXZ3 194 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 GLCCI1Q86VQ1 547 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 CDCA4Q9BXL8 241 aa11.21□□□□□ -0.61
LIN54-201ENST00000340417 ZNF275Q9NSD4 429 aaPredicted RBP11.21□□□□□ -0.61
LIN54-201ENST00000340417 A8MV72 311 aaPredicted RBP11.21□□□□□ -0.62
LIN54-201ENST00000340417 ACSM1Q08AH1 577 aa11.21□□□□□ -0.62
LIN54-201ENST00000340417 NUDT16L1Q9BRJ7 211 aaKnown RBP11.21□□□□□ -0.62
LIN54-201ENST00000340417 SMIM3Q9BZL3 60 aa11.21□□□□□ -0.62
LIN54-201ENST00000340417 A0A0B4J203 849 aa11.21□□□□□ -0.62
LIN54-201ENST00000340417 IGHV1-69-2A0A0G2JMI3 117 aa11.21□□□□□ -0.62
LIN54-201ENST00000340417 CTDSP2O14595 271 aa11.21□□□□□ -0.62
LIN54-201ENST00000340417 EPHA2P29317 976 aa11.21□□□□□ -0.62
LIN54-201ENST00000340417 ZNF816Q0VGE8 651 aaPredicted RBP11.21□□□□□ -0.62
LIN54-201ENST00000340417 NUDCD2Q8WVJ2 157 aa11.21□□□□□ -0.62
LIN54-201ENST00000340417 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.21□□□□□ -0.62
LIN54-201ENST00000340417 GMDSO60547 372 aa11.2□□□□□ -0.62
LIN54-201ENST00000340417 FOXH1O75593 365 aa11.2□□□□□ -0.62
LIN54-201ENST00000340417 HMGA2P52926 109 aa11.2□□□□□ -0.62
LIN54-201ENST00000340417 OR10A3P58181 314 aa11.2□□□□□ -0.62
LIN54-201ENST00000340417 BRICD5Q6PL45 260 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms