RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 GATA4P43694 442 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 PPOXP50336 477 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 ART1P52961 327 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 MAB21L1Q13394 359 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 RSU1Q15404 277 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 MST1LQ2TV78 715 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 C2orf76Q3KRA6 126 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 SLC25A26Q70HW3 274 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 RNF144BQ7Z419 303 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 CDH24Q86UP0 819 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 DTX2Q86UW9 622 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 Q8IYB0 196 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 OR51F2Q8NH61 342 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 RAB40AQ8WXH6 277 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 AQP3Q92482 292 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 ERGIC1Q969X5 290 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 MRPS24Q96EL2 167 aaKnown RBP12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 CEP19Q96LK0 163 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 C1orf147Q96MC9 270 aaPredicted RBP12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 OR2V2Q96R30 315 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 NKX3-1Q99801 234 aaPredicted RBP12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 EGLN1Q9GZT9 426 aa12.34□□□□□ -0.43
NIPAL3-202ENST00000339255 CTDSP2O14595 271 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 LDLRAD4O15165 306 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 SPRY3O43610 288 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 CTAG2O75638 210 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 SCGNO76038 276 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 PLATP00750 562 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 CSTBP04080 98 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 ACAA1P09110 424 aaPredicted RBP12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 TNFRSF1AP19438 455 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 TALDO1P37837 337 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 QRFPP83859 136 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 TNFAIP6P98066 277 aaPredicted RBP12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 TLE4Q04727 773 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 TESK1Q15569 626 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 SLC22A6Q4U2R8 563 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 SPANXN2Q5MJ10 180 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 WDR86Q86TI4 376 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 LAX1Q8IWV1 398 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 SCCPDHQ8NBX0 429 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 GTF3AQ92664 365 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 ABCG5Q9H222 651 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 RHBDL2Q9NX52 303 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 RAB22AQ9UL26 194 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 TANC2Q9HCD6 1990 aa12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-202ENST00000339255 TMEM272A0A1B0GTI8 110 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 A1L4Q6 167 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 METTL21EPA6NDL7 271 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 TMEM14DPA8MWL7 114 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 SPRY1O43609 319 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 HPGDSO60760 199 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 KDM4BO94953 1096 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 VSIG8P0DPA2 414 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 LSAMPQ13449 338 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 OR5H6Q8NGV6 325 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 S100ZQ8WXG8 99 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 SLC25A38Q96DW6 304 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 POM121Q96HA1 1249 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 MEGF10Q96KG7 1140 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 TMEM59Q9BXS4 323 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 FN3KRPQ9HA64 309 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 ELL3Q9HB65 397 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 ING4Q9UNL4 249 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 DYSFO75923 2080 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 AKAP6Q13023 2319 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 A0A0A6YYH2 397 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 A6NJ64 397 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 A6NLC8 198 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 TRAPPC2LH3BP13 241 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 CRTAPO75718 401 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 GRPP07492 148 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 DANCRP0C864 163 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 GTF2F2P13984 249 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 CFHR2P36980 270 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 SP5Q6BEB4 398 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 ELP2Q6IA86 826 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 C1QL2Q7Z5L3 287 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 Q8NFD4 153 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 PHF21AQ96BD5 680 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 S100A16Q96FQ6 103 aaKnown RBP12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 MIXL1Q9H2W2 232 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 CLEC4MQ9H2X3 399 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 DECR2Q9NUI1 292 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 RABL2AQ9UBK7 228 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 RABL2BQ9UNT1 228 aa12.32□□□□□ -0.44
NIPAL3-202ENST00000339255 PTPN13Q12923 2485 aa12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 GCN1Q92616 2671 aaKnown RBP12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 A0A1W2PPR1 153 aa12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM25AB3EWG3 89 aa12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM25CB3EWG5 89 aa12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 FAM25GB3EWG6 89 aa12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 CDIPTO14735 213 aa12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 ANGPTL7O43827 346 aa12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 NOS1APO75052 506 aaPredicted RBP12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 MGMTP16455 207 aa12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 ELK1P19419 428 aa12.31□□□□□ -0.44
NIPAL3-202ENST00000339255 SERPINA2P20848 420 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms