RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 GPR176Q14439 515 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 HAGHLQ6PII5 290 aaPredicted RBP12.54□□□□□ -0.4
CBX3-201ENST00000337620 ASCL4Q6XD76 172 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 CDH24Q86UP0 819 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 ZNF573Q86YE8 665 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 PXT1Q8NFP0 134 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 OR10AD1Q8NGE0 317 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 TMEM171Q8WVE6 324 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 MSL2Q9HCI7 577 aa12.54□□□□□ -0.4
CBX3-201ENST00000337620 A0A0A6YYD4 124 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 IGHV3-64DA0A0J9YX35 117 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 MEIOCA2RUB1 952 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 GABARAPH6UMI1 98 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 GSTZ1O43708 216 aaPredicted RBP12.53□□□□□ -0.4
CBX3-201ENST00000337620 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
CBX3-201ENST00000337620 TPPPO94811 219 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 CYB5AP00167 134 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 CHRM2P08172 466 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 GTF2F2P13984 249 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 KLF3P57682 345 aaPredicted RBP12.53□□□□□ -0.4
CBX3-201ENST00000337620 FAM189A2Q15884 450 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 TRIM16LQ309B1 348 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 CENPSQ8N2Z9 138 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 OR10R2Q8NGX6 335 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 TRIM63Q969Q1 353 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 SLAMF9Q96A28 289 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 NOP16Q9Y3C1 178 aaKnown RBP12.53□□□□□ -0.4
CBX3-201ENST00000337620 EPG5Q9HCE0 2579 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 SOCS1O15524 211 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 MLNRO43193 412 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 ZG16O60844 167 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 SCGNO76038 276 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 SFTPBP07988 381 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 PRSS3P35030 304 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 SRP9P49458 86 aaKnown RBP12.53□□□□□ -0.4
CBX3-201ENST00000337620 MRPS10P82664 201 aaKnown RBP12.53□□□□□ -0.4
CBX3-201ENST00000337620 CDNFQ49AH0 187 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 Q6ZR03 302 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 MKXQ8IYA7 352 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 ZSCAN4Q8NAM6 433 aaPredicted RBP12.53□□□□□ -0.4
CBX3-201ENST00000337620 OR56B1Q8NGI3 324 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 CHPT1Q8WUD6 406 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 ESRP2Q9H6T0 727 aaKnown RBP12.53□□□□□ -0.4
CBX3-201ENST00000337620 NKIRAS2Q9NYR9 191 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 KLK11Q9UBX7 282 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 POU2F3Q9UKI9 436 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 ELF5Q9UKW6 265 aaPredicted RBP12.53□□□□□ -0.4
CBX3-201ENST00000337620 ATP23Q9Y6H3 246 aa12.53□□□□□ -0.4
CBX3-201ENST00000337620 HIVEP3Q5T1R4 2406 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.52□□□□□ -0.4
CBX3-201ENST00000337620 A0A1B0GVG6 124 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 SYNGR1O43759 233 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 IGHV3-13P01766 116 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 GABRR1P24046 479 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 NPBWR2P48146 333 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 SELENOVP59797 346 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 GUCA2AQ02747 115 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 ADAM5Q6NVV9 412 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 OSR2Q8N2R0 312 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 NUP37Q8NFH4 326 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 OR13G1Q8NGZ3 307 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 SETD6Q8TBK2 473 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 PLPPR2Q96GM1 343 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 SLC22A4Q9H015 551 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 OR51I2Q9H344 312 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 PCDHB16Q9NRJ7 776 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 CA10Q9NS85 328 aa12.52□□□□□ -0.4
CBX3-201ENST00000337620 TMEM235A6NFC5 223 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 WIPF3A6NGB9 483 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 TUBAL3A6NHL2 446 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 F5H5P2 479 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 PLA2G10O15496 165 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 ORC5O43913 435 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 GRPP07492 148 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 GNB3P16520 340 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 BCL3P20749 454 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 CPT2P23786 658 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 GDNFP39905 211 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 SORDQ00796 357 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 ASAH1Q13510 395 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 DCDC5Q6ZRR9 648 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 Q6ZTK2 550 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 WDR86Q86TI4 376 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 TOMM5Q8N4H5 51 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 RAB3CQ96E17 227 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 MRPL37Q9BZE1 423 aaKnown RBP12.52□□□□□ -0.41
CBX3-201ENST00000337620 IL36GQ9NZH8 169 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 MTCH1Q9NZJ7 389 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 ZFYVE26Q68DK2 2539 aa12.52□□□□□ -0.41
CBX3-201ENST00000337620 MEIS3P1A6NDR6 274 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 B8ZZF3 427 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 TRAPPC2LH3BP13 241 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 BLVRBP30043 206 aaPredicted RBP12.51□□□□□ -0.41
CBX3-201ENST00000337620 OXA1LQ15070 435 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 ZNF260Q3ZCT1 412 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 NCMAPQ5T1S8 102 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 RTN4RL2Q86UN3 420 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 SAXO1Q8IYX7 474 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 FBXL14Q8N1E6 418 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms