RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 SHEQ5VZ18 495 aa20.05■□□□□ 0.8
CLPTM1-201ENST00000337392 CCDC107Q8WV48 283 aa20.05■□□□□ 0.8
CLPTM1-201ENST00000337392 PDCD10Q9BUL8 212 aa20.05■□□□□ 0.8
CLPTM1-201ENST00000337392 PTTG3PQ9NZH4 202 aa20.05■□□□□ 0.8
CLPTM1-201ENST00000337392 RELNP78509 3460 aa20.05■□□□□ 0.8
CLPTM1-201ENST00000337392 ANKRD11Q6UB99 2663 aaPredicted RBP20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 C5orf49A4QMS7 147 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 MPTX1A8MV57 137 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 EEF1E1-BLOC1S5C9J1V9 151 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 NGFP01138 241 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 PDGFAP04085 211 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 RIPPLY1Q0D2K3 151 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 SLC25A42Q86VD7 318 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 CALHM1Q8IU99 346 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 SUMF1Q8NBK3 374 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 C5orf66Q9H5L9 145 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 GPR160Q9UJ42 338 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 RPS10-NUDT3A0A1W2PQS6 291 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 A0A1W2PR80 420 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 FOXI3A8MTJ6 420 aaPredicted RBP20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 EFSO43281 561 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 CSNK2A3Q8NEV1 391 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 OR13G1Q8NGZ3 307 aa20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 ALX4Q9H161 411 aaPredicted RBP20.04■□□□□ 0.8
CLPTM1-201ENST00000337392 DHRS7CA6NNS2 312 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 GEMIN2O14893 280 aaKnown RBP20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 NRASP01111 189 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 MOB3CQ70IA8 216 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 FAM89BQ8N5H3 189 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 CDC6Q99741 560 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 FAM86C1Q9NVL1 165 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 PLEKHJ1Q9NW61 149 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 ABI3Q9P2A4 366 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 TNRC6AQ8NDV7 1962 aaKnown RBP20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 CEP295Q9C0D2 2601 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 B3GALNT1O75752 331 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 GSTP1P09211 210 aaKnown RBP20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 ATP1B3P54709 279 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 HIKESHIQ53FT3 197 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 CDH26Q8IXH8 852 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 LDAHQ9H6V9 325 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 SLC2A8Q9NY64 477 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 EHFQ9NZC4 300 aa20.03■□□□□ 0.8
CLPTM1-201ENST00000337392 hCG_38984A0A1B0GV85 526 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 C13orf42A0A1B0GVH6 325 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 ZNF850A8MQ14 1090 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 ZNF250P15622 560 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 GLRA1P23415 457 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 ARG2P78540 354 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 EIF3IQ13347 325 aaKnown RBP20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 RSU1Q15404 277 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 JMJD6Q6NYC1 403 aaPredicted RBP20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 TMUB2Q71RG4 321 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 LYG2Q86SG7 212 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 TMEM230Q96A57 120 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 BORCS8Q96FH0 119 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 HS3ST6Q96QI5 342 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 RDH8Q9NYR8 311 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 KALRNO60229 2985 aa20.02■□□□□ 0.8
CLPTM1-201ENST00000337392 BET1O15155 118 aa20.02■□□□□ 0.79
CLPTM1-201ENST00000337392 NPBWR2P48146 333 aa20.02■□□□□ 0.79
CLPTM1-201ENST00000337392 PLCXD3Q63HM9 321 aa20.02■□□□□ 0.79
CLPTM1-201ENST00000337392 MDS2Q8NDY4 140 aa20.02■□□□□ 0.79
CLPTM1-201ENST00000337392 OR10Z1Q8NGY1 313 aa20.02■□□□□ 0.79
CLPTM1-201ENST00000337392 DMRTA2Q96SC8 542 aa20.02■□□□□ 0.79
CLPTM1-201ENST00000337392 SPRR3Q9UBC9 169 aa20.02■□□□□ 0.79
CLPTM1-201ENST00000337392 MRPS18CQ9Y3D5 142 aaKnown RBP20.02■□□□□ 0.79
CLPTM1-201ENST00000337392 KMT2EQ8IZD2 1858 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 ADAP1O75689 374 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 SPDEFO95238 335 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 CCL11P51671 97 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 RIPPLY2Q5TAB7 128 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 TMEM65Q6PI78 240 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 HOGA1Q86XE5 327 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 OR5M8Q8NGP6 311 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 OR5H2Q8NGV7 314 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 ESPL1Q14674 2120 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 ARHGAP21Q5T5U3 1957 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 OR5H14A6NHG9 310 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 TSPAN4O14817 238 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 SYNGR4O95473 234 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 SERPINA5P05154 406 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 AADACL3Q5VUY0 350 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 TERB2Q8NHR7 220 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 PPP1R1CQ8WVI7 109 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 WDR13Q9H1Z4 485 aa20.01■□□□□ 0.79
CLPTM1-201ENST00000337392 NME2P1O60361 137 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 CSTBP04080 98 aaKnown RBP20■□□□□ 0.79
CLPTM1-201ENST00000337392 NME2P22392 152 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 MARC2Q969Z3 335 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 Q96M66 194 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 UBQLN2Q9UHD9 624 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 NDUFA2O43678 99 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 LILRA1O75019 489 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 FARS2O95363 451 aaKnown RBP20■□□□□ 0.79
CLPTM1-201ENST00000337392 KNG1P01042 644 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 APOC1P02654 83 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 FTH1P19P0C7X4 201 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 S100A11P31949 105 aa20■□□□□ 0.79
CLPTM1-201ENST00000337392 DHODHQ02127 395 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms