RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 TMEM240Q5SV17 173 aa11.72□□□□□ -0.53
HLCS-201ENST00000336648 UBALD1Q8TB05 177 aa11.72□□□□□ -0.53
HLCS-201ENST00000336648 Q9N2K0 584 aa11.72□□□□□ -0.53
HLCS-201ENST00000336648 CLEC1BQ9P126 229 aa11.72□□□□□ -0.53
HLCS-201ENST00000336648 HIST1H1DP16402 221 aaKnown RBP11.71□□□□□ -0.53
HLCS-201ENST00000336648 FAHP16930 419 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
HLCS-201ENST00000336648 TTC32Q5I0X7 151 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 FAAP20Q6NZ36 180 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 ADAT1Q9BUB4 502 aaKnown RBP11.71□□□□□ -0.53
HLCS-201ENST00000336648 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 EDIL3O43854 480 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 DHRS3O75911 302 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 ZNF816Q0VGE8 651 aaPredicted RBP11.71□□□□□ -0.53
HLCS-201ENST00000336648 MICBQ29980 383 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 CD300LDQ6UXZ3 194 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 ACY3Q96HD9 319 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 MMP25Q9NPA2 562 aa11.71□□□□□ -0.53
HLCS-201ENST00000336648 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 METTL12A8MUP2 240 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 PYCARD-AS1I3L0S3 204 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 RHOBP62745 196 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 FAHD2BQ6P2I3 314 aaPredicted RBP11.71□□□□□ -0.54
HLCS-201ENST00000336648 FAM24BQ8N5W8 94 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 FAHD2AQ96GK7 314 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 SEBOXQ9HB31 216 aaPredicted RBP11.71□□□□□ -0.54
HLCS-201ENST00000336648 MTFP1Q9UDX5 166 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 IL17BQ9UHF5 180 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 EXOGQ9Y2C4 368 aaKnown RBP11.71□□□□□ -0.54
HLCS-201ENST00000336648 SCN11AQ9UI33 1791 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 SPTY2D1-AS1A0A0U1RR47 76 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 CXCL10P02778 98 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 EPHA2P29317 976 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 SLC6A1P30531 599 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 SLC25A35Q3KQZ1 300 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 MOB3BQ86TA1 216 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 ETFBKMTQ8IXQ9 262 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 TDHQ8IZJ6 230 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 OR13G1Q8NGZ3 307 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 SLC35B3Q9H1N7 401 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.54
HLCS-201ENST00000336648 SLC25A5P05141 298 aaKnown RBP11.7□□□□□ -0.54
HLCS-201ENST00000336648 IL11RAQ14626 422 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 TMEM179BQ7Z7N9 219 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 TUSC5Q8IXB3 177 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 MRPL13Q9BYD1 178 aaKnown RBP11.7□□□□□ -0.54
HLCS-201ENST00000336648 PRDM7Q9NQW5 492 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 TRGV5A0A0B4J1U4 118 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 PRR35P0CG20 571 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 BCL3P20749 454 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 DLX1P56177 255 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 SLC38A11Q08AI6 406 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 AGERQ15109 404 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 PACRGQ96M98 296 aaPredicted RBP11.7□□□□□ -0.54
HLCS-201ENST00000336648 CXCL16Q9H2A7 254 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 KLK11Q9UBX7 282 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 MMP24Q9Y5R2 645 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 TRGV8A0A0C4DH27 118 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 SHISA7A6NL88 538 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 GPANK1O95872 356 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 PRDX4Q13162 271 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 HLA-BQ31612 363 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 JMJD6Q6NYC1 403 aaPredicted RBP11.7□□□□□ -0.54
HLCS-201ENST00000336648 FGF14Q92915 247 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 MCHR2Q969V1 340 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 SIGLEC7Q9Y286 467 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 GOSR1O95249 250 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 DEFB109BQ30KR1 87 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 C6orf201Q7Z4U5 140 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 CADM4Q8NFZ8 388 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 DERL3Q96Q80 235 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 DOK1Q99704 481 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 ASB1Q9Y576 335 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 NGFP01138 241 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 PNRC1Q12796 327 aaPredicted RBP11.7□□□□□ -0.54
HLCS-201ENST00000336648 SURF2Q15527 256 aaPredicted RBP11.7□□□□□ -0.54
HLCS-201ENST00000336648 SSX1Q16384 188 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 PATE1Q8WXA2 126 aa11.7□□□□□ -0.54
HLCS-201ENST00000336648 TINAGL1Q9GZM7 467 aaPredicted RBP11.7□□□□□ -0.54
HLCS-201ENST00000336648 ETHE1O95571 254 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 EPPINO95925 133 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 KRASP01116 189 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 HOXC4P09017 264 aaPredicted RBP11.69□□□□□ -0.54
HLCS-201ENST00000336648 SDHBP21912 280 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 CEACAM3P40198 252 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 COL5A1-AS1Q5SY13 56 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 OR4A47Q6IF82 309 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 TMEM218A2RU14 115 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 ALG1L2C9J202 215 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 SH2D5Q6ZV89 423 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 ZNF383Q8NA42 475 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 NARFLQ9H6Q4 476 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 OR5B21A6NL26 309 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 SPINK4O60575 86 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 OPN1MWP04001 364 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 OPN1MW2P0DN77 364 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 OPN1MW3P0DN78 364 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 PRRX1P54821 245 aa11.69□□□□□ -0.54
HLCS-201ENST00000336648 CTF1Q16619 201 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms