RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 IL24Q13007 206 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF345Q14585 488 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 VN1R17PQ8TDU5 208 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 SLIRPQ9GZT3 109 aaKnown RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CXorf36Q9H7Y0 433 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 STARD5Q9NSY2 213 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 SOX21Q9Y651 276 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-201ENST00000335551 A0A1B0GV90 55 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 MYADML2A6NDP7 307 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 HCRTO43612 131 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF253O75346 499 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 P01737 135 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 GRPP07492 148 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CLDN15P56746 228 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 C19orf57Q0VDD7 668 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 NR0B2Q15466 257 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 DNLZQ5SXM8 178 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 SLC7A10Q9NS82 523 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 CTNSO60931 367 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 NUDT3O95989 172 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 GUSBP08236 651 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PNLIPRP2P54317 469 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 BSXQ3C1V8 233 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PABPC1L2AQ5JQF8 200 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 KHDC1LQ5JSQ8 128 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 PATJQ8NI35 1801 aa5.58□□□□□ -1.52
CSMD1-201ENST00000335551 RAB29O14966 203 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 BCAT2O15382 392 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 OPRM1P35372 400 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 PRTGQ2VWP7 1150 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 TRAT1Q6PIZ9 186 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 CALHM1Q8IU99 346 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 MYOZ3Q8TDC0 251 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 TBX15Q96SF7 602 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 PMCHL2Q9BQD1 86 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ST3GAL6Q9Y274 331 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 DMRT1Q9Y5R6 373 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 C21orf58P58505 322 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 JAG1P78504 1218 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM136Q6ZRR5 245 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 BCDIN3DQ7Z5W3 292 aaKnown RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 OR51E1Q8TCB6 317 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 KCNE4Q8WWG9 221 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 CDCP1Q9H5V8 836 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 RASL12Q9NYN1 266 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 Q56UQ5 140 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 OR5AS1Q8N127 324 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 D2HGDHQ8N465 521 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 CDX2Q99626 313 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 CHRNA10Q9GZZ6 450 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM38BQ9NVV0 291 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 FUT9Q9Y231 359 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 TRGV10A0A0A0MS01 117 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 LOC107984156A0A0G2JMH3 177 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 MT-ND6P03923 174 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 OR5AC1P0C628 307 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 EDN3P14138 238 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 RGRP47804 291 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 UQCRFS1P47985 274 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 CAMPP49913 170 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 FGF8P55075 233 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 DUSP5Q16690 384 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF542PQ5EBM4 170 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 RNF165Q6ZSG1 346 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ARL17AQ8IVW1 177 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 MUC20Q8N307 709 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 CLDN23Q96B33 292 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 PBOV1Q9GZY1 135 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 LINC00862A6NCI5 91 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 M0R135 149 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 SPINK4O60575 86 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ZBTB25P24278 435 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 C9orf135Q5VTT2 229 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 LIPNQ5VXI9 398 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ZCCHC14Q8WYQ9 949 aaKnown RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF799Q96GE5 643 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ADTRPQ96IZ2 230 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 PTPRDP23468 1912 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM30CPA0ZSE6 113 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ADAM20O43506 726 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 IGHA1P01876 353 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 IGHA2P01877 340 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ACRP10323 421 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 RBPMS2Q6ZRY4 209 aaKnown RBP5.57□□□□□ -1.52
CSMD1-201ENST00000335551 Q7L0L9 218 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 OVCH2Q7RTZ1 564 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 TBC1D26Q86UD7 250 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF384Q8TF68 577 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 HAPLN2Q9GZV7 340 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 SLC25A22Q9H936 323 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 VAX2Q9UIW0 290 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 PI3P19957 117 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 FUT6P51993 359 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ST3GAL2Q16842 350 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF766Q5HY98 468 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 KMT5CQ86Y97 462 aa5.57□□□□□ -1.52
CSMD1-201ENST00000335551 GEMIN2O14893 280 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms