RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 J3QT63 122 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 CDIPTO14735 213 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 TMEM225BP0DP42 221 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 CCL8P80075 99 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 PLA2G7Q13093 441 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 ZNF826PQ6ZT77 177 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 TMEM200AQ86VY9 491 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 MCFD2Q8NI22 146 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 LGALS14Q8TCE9 139 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 KCTD12Q96CX2 325 aaKnown RBP18.2■□□□□ 0.5
TPM1-204ENST00000334895 PKIBQ9C010 78 aa18.2■□□□□ 0.5
TPM1-204ENST00000334895 FBN2P35556 2912 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 A0A075B6Q4 140 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 TMEM127O75204 238 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 TNFSF4P23510 183 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 GATA4P43694 442 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 SRP9P49458 86 aaKnown RBP18.19■□□□□ 0.5
TPM1-204ENST00000334895 QRFPP83859 136 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 MZT1Q08AG7 82 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 C2orf76Q3KRA6 126 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 FAM209AQ5JX71 171 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 TBC1D15Q8TC07 691 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 IGFBPL1Q8WX77 278 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 UFSP2Q9NUQ7 469 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 MTCH1Q9NZJ7 389 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 ABRACLQ9P1F3 81 aa18.19■□□□□ 0.5
TPM1-204ENST00000334895 A0A1W2PP11 408 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 C3orf80F5H4A9 247 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 LDLRAD4O15165 306 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 PMELP40967 661 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 IL24Q13007 206 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 OR10K2Q6IF99 312 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 ZSCAN4Q8NAM6 433 aaPredicted RBP18.18■□□□□ 0.5
TPM1-204ENST00000334895 PXT1Q8NFP0 134 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 OR10K1Q8NGX5 313 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 OR51F2Q8NH61 342 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 ZNF671Q8TAW3 534 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 AP3S1Q92572 193 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 SLAMF9Q96A28 289 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 CACNG6Q9BXT2 260 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 SMURF1Q9HCE7 757 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 ING4Q9UNL4 249 aa18.18■□□□□ 0.5
TPM1-204ENST00000334895 ABCA12Q86UK0 2595 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 F8VVB4 439 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 F8VWA3 439 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 CTDSP2O14595 271 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 BPNT1O95861 308 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 VSIG8P0DPA2 414 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 CALCBP10092 127 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 ARSBP15848 533 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 BMXP51813 675 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 HOXA4Q00056 320 aaPredicted RBP18.17■□□□□ 0.5
TPM1-204ENST00000334895 UNC119Q13432 240 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 PCGF3Q3KNV8 242 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 WDR82Q6UXN9 313 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 MOGAT3Q86VF5 341 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 BATF2Q8N1L9 274 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 ACOT12Q8WYK0 555 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 ZNF488Q96MN9 340 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 VRK1Q99986 396 aaPredicted RBP18.17■□□□□ 0.5
TPM1-204ENST00000334895 GCM1Q9NP62 436 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 COMMD3Q9UBI1 195 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 A3GALT2U3KPV4 340 aa18.17■□□□□ 0.5
TPM1-204ENST00000334895 TMEM272A0A1B0GTI8 110 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 A6NLC8 198 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 SFTPBP07988 381 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 NPBWR2P48146 333 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 DYNC1I2Q13409 638 aaKnown RBP18.16■□□□□ 0.5
TPM1-204ENST00000334895 TESK1Q15569 626 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 C20orf204Q6ZNR8 217 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 TGIF2LYQ8IUE0 185 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 SAXO1Q8IYX7 474 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 TMEM104Q8NE00 496 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 C6orf62Q9GZU0 229 aaPredicted RBP18.16■□□□□ 0.5
TPM1-204ENST00000334895 C1orf123Q9NWV4 160 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 SPATA2Q9UM82 520 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 TMEM14DPA8MWL7 114 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 KDM4BO94953 1096 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 HPXP02790 462 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 EFNB2P52799 333 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 SLC22A6Q4U2R8 563 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 SLC25A38Q96DW6 304 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 MIXL1Q9H2W2 232 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 MMP27Q9H306 513 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 SAP30LQ9HAJ7 183 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 IL36GQ9NZH8 169 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 GHRLQ9UBU3 117 aa18.16■□□□□ 0.5
TPM1-204ENST00000334895 CLPXO76031 633 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 UBBP0CG47 229 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 BMP4P12644 408 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 BCL3P20749 454 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 SSTR2P30874 369 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 SCAND1P57086 179 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 BIVMQ86UB2 503 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 MKXQ8IYA7 352 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 FAM46BQ96A09 425 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 MRI1Q9BV20 369 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 METTL9Q9H1A3 318 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 LIME1Q9H400 295 aa18.15■□□□□ 0.5
TPM1-204ENST00000334895 FN3KRPQ9HA64 309 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms