RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 LIPGQ9Y5X9 500 aa21.43■■□□□ 1.02
SOX1-201ENST00000330949 NSG1A0A0A6YYJ2 146 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 H2BFMP0C1H6 154 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 SGCBQ16585 318 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 SPSB3Q6PJ21 355 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 YAF2Q8IY57 180 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 FAM160A2Q8N612 972 aaPredicted RBP21.42■■□□□ 1.02
SOX1-201ENST00000330949 TMEM242Q9NWH2 141 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 CRYM-AS1A6NIL9 109 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 PCP4P48539 62 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 FOXK1P85037 733 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 IL13RA2Q14627 380 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 BANF2Q9H503 90 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 SDK1Q7Z5N4 2213 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 TRAV36DV7A0A075B6V5 113 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 SCAF4O95104 1147 aaKnown RBP21.42■■□□□ 1.02
SOX1-201ENST00000330949 AMBPP02760 352 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 CTSDP07339 412 aaPredicted RBP21.42■■□□□ 1.02
SOX1-201ENST00000330949 HLA-DRB3P79483 266 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 CHRDL2Q6WN34 429 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 C16orf52Q8NHV5 167 aa21.42■■□□□ 1.02
SOX1-201ENST00000330949 A6NIZ1 184 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 ZNF705GA8MUZ8 300 aaPredicted RBP21.41■■□□□ 1.02
SOX1-201ENST00000330949 SCDO00767 359 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 XRCC2O43543 280 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 TTRP02766 147 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 RND2P52198 227 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 RAP1BP61224 184 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 GPR137CQ8N3F9 429 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 DNAJA3Q96EY1 480 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 SNHG12Q9BXW3 62 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 IL18BPO95998 194 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 CA3P07451 260 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 BCKDHBP21953 392 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 ANKRD39Q53RE8 183 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 ZNF506Q5JVG8 444 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 OR2G3Q8NGZ4 309 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 C1orf147Q96MC9 270 aaPredicted RBP21.41■■□□□ 1.02
SOX1-201ENST00000330949 CENPMQ9NSP4 180 aa21.41■■□□□ 1.02
SOX1-201ENST00000330949 CLDN34H7C241 214 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 OR5AC1P0C628 307 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 ZNF25P17030 456 aaPredicted RBP21.4■■□□□ 1.02
SOX1-201ENST00000330949 RPS21P63220 83 aaKnown RBP21.4■■□□□ 1.02
SOX1-201ENST00000330949 TFF2Q03403 129 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 ICAM4Q14773 271 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 C9orf40Q8IXQ3 194 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 STT3BQ8TCJ2 826 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 RELTQ969Z4 430 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 ZNF700Q9H0M5 742 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 FAM230AA0A1W2PPH8 454 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 M0R143 59 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 PRKNO60260 465 aaPredicted RBP21.4■■□□□ 1.02
SOX1-201ENST00000330949 MT-ATP6P00846 226 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 ZNF20P17024 532 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 APLNRP35414 380 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 ACY1Q03154 408 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 ZNF266Q14584 549 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 TMEM176BQ3YBM2 270 aaPredicted RBP21.4■■□□□ 1.02
SOX1-201ENST00000330949 LINC00346Q8IVM7 164 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 FAM3CQ92520 227 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 ZNF524Q96C55 264 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 SPACA5Q96QH8 159 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 OR2M4Q96R27 311 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 AK3Q9UIJ7 227 aa21.4■■□□□ 1.02
SOX1-201ENST00000330949 MUC22E2RYF6 1773 aaPredicted RBP21.4■■□□□ 1.02
SOX1-201ENST00000330949 PRSS38A1L453 326 aa21.39■■□□□ 1.02
SOX1-201ENST00000330949 SOX1O00570 391 aaPredicted RBP21.39■■□□□ 1.02
SOX1-201ENST00000330949 DIRAS3O95661 229 aa21.39■■□□□ 1.02
SOX1-201ENST00000330949 GABRR1P24046 479 aa21.39■■□□□ 1.02
SOX1-201ENST00000330949 FZD2Q14332 565 aa21.39■■□□□ 1.02
SOX1-201ENST00000330949 SLC26A10Q8NG04 563 aa21.39■■□□□ 1.02
SOX1-201ENST00000330949 OR1E3Q8WZA6 343 aa21.39■■□□□ 1.02
SOX1-201ENST00000330949 FAM206AQ9NX38 181 aa21.39■■□□□ 1.02
SOX1-201ENST00000330949 GEMIN2O14893 280 aaKnown RBP21.39■■□□□ 1.01
SOX1-201ENST00000330949 CRTAPO75718 401 aaPredicted RBP21.39■■□□□ 1.01
SOX1-201ENST00000330949 CRYABP02511 175 aaKnown RBP21.39■■□□□ 1.01
SOX1-201ENST00000330949 OIT3Q8WWZ8 545 aa21.39■■□□□ 1.01
SOX1-201ENST00000330949 RCL1Q9Y2P8 373 aaKnown RBP21.39■■□□□ 1.01
SOX1-201ENST00000330949 WDR87Q6ZQQ6 2873 aa21.39■■□□□ 1.01
SOX1-201ENST00000330949 TRBV24-1A0A075B6N3 115 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 GPR3P46089 330 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 POMZP3Q6PJE2 187 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 ZFP62Q8NB50 900 aaPredicted RBP21.38■■□□□ 1.01
SOX1-201ENST00000330949 TMEM106CQ9BVX2 250 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 PNLIPP16233 465 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 ZNF542PQ5EBM4 170 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 KLHL24Q6TFL4 600 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 ADGRG7Q96K78 797 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 OR10A5Q9H207 317 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 OR10A2Q9H208 303 aa21.38■■□□□ 1.01
SOX1-201ENST00000330949 APODP05090 189 aa21.37■■□□□ 1.01
SOX1-201ENST00000330949 FOLR1P15328 257 aa21.37■■□□□ 1.01
SOX1-201ENST00000330949 OR3A4PP47883 348 aa21.37■■□□□ 1.01
SOX1-201ENST00000330949 PNRC1Q12796 327 aaPredicted RBP21.37■■□□□ 1.01
SOX1-201ENST00000330949 CDH20Q9HBT6 801 aa21.37■■□□□ 1.01
SOX1-201ENST00000330949 C2orf16Q68DN1 1984 aa21.37■■□□□ 1.01
SOX1-201ENST00000330949 ST8SIA3O43173 380 aa21.37■■□□□ 1.01
SOX1-201ENST00000330949 DEFB110Q30KQ9 67 aa21.37■■□□□ 1.01
SOX1-201ENST00000330949 OR1P1Q8NH06 330 aa21.37■■□□□ 1.01
SOX1-201ENST00000330949 RNF133Q8WVZ7 376 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms