RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 TAF9Q16594 264 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 MICBQ29980 383 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 CEACAM21Q3KPI0 293 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 SCGB2B2Q4G0G5 96 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 ZNF610Q8N9Z0 462 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 OR4K15Q8NH41 348 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 OR51F2Q8NH61 342 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 MBD3L2Q8NHZ7 208 aaPredicted RBP14.58□□□□□ -0.08
DDX41-201ENST00000330503 CAPSLQ8WWF8 208 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 TRAF4Q9BUZ4 470 aaPredicted RBP14.58□□□□□ -0.08
DDX41-201ENST00000330503 ALX4Q9H161 411 aaPredicted RBP14.58□□□□□ -0.08
DDX41-201ENST00000330503 GPN1Q9HCN4 374 aaPredicted RBP14.58□□□□□ -0.08
DDX41-201ENST00000330503 ZNF69Q9UC07 566 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 NPTNQ9Y639 398 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 DCHS1Q96JQ0 3298 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 APC2O95996 2303 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 FIGNL2A6NMB9 653 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 ZNF780AO75290 641 aaPredicted RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 CA11O75493 328 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 HOXB1P14653 301 aaPredicted RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 TBPP20226 339 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 IL32P24001 234 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 TBC1D28Q2M2D7 210 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 ATPAF1Q5TC12 328 aaPredicted RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 INO80CQ6PI98 192 aaPredicted RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 HOGA1Q86XE5 327 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 PLSCR3Q9NRY6 295 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 PLEKHA6Q9Y2H5 1048 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 CACNA1GO43497 2377 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 CREBL2O60519 120 aaPredicted RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 CRYABP02511 175 aaKnown RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 ANXA3P12429 323 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 ERP29P30040 261 aaKnown RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 CBX5P45973 191 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 IDH3GP51553 393 aaPredicted RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 ZDHHC23Q8IYP9 409 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 FBXL14Q8N1E6 418 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 OSR2Q8N2R0 312 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 SPICQ8N5J4 248 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 ZSCAN4Q8NAM6 433 aaPredicted RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 OR5L1Q8NGL2 311 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 PRRT1Q99946 306 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 OPN3Q9H1Y3 402 aaPredicted RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 ZNF230Q9UIE0 474 aaPredicted RBP14.57□□□□□ -0.08
DDX41-201ENST00000330503 VSIG4Q9Y279 399 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 FAM215AQ9Y5M1 114 aa14.57□□□□□ -0.08
DDX41-201ENST00000330503 TMEM82A0PJX8 343 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 SERPINE3A8MV23 424 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 MSTNO14793 375 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 AKR7A2O43488 359 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 AGFG2O95081 481 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 NPBWR2P48146 333 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 GPM6AP51674 278 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 MRPS15P82914 257 aaKnown RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 PIGYQ3MUY2 71 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 Q5BKY6 102 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 SPATA46Q5T0L3 261 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 SLC25A26Q70HW3 274 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 NLRC3Q7RTR2 1065 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 ZNF611Q8N823 705 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 BHLHE23Q8NDY6 225 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 Q8NFD4 153 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 RADILQ96JH8 1075 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 FAAP24Q9BTP7 215 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 ST6GALNAC5Q9BVH7 336 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 ZNF436Q9C0F3 470 aaPredicted RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 DLL4Q9NR61 685 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 PLEKHJ1Q9NW61 149 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 MSRB2Q9Y3D2 182 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 SVILO95425 2214 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 ANKRD11Q6UB99 2663 aaPredicted RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 OR2AT4A6NND4 320 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 ZNF732B4DXR9 585 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 GEMIN2O14893 280 aaKnown RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 CBR1P16152 277 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 DAZAP2Q15038 168 aaPredicted RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 ARL6IP1Q15041 203 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 TBR1Q16650 682 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 NKAPLQ5M9Q1 402 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 OR2T2Q6IF00 324 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 CXorf67Q86X51 503 aaPredicted RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 MUC20Q8N307 709 aaPredicted RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 RPRMLQ8N4K4 120 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 C1orf162Q8NEQ5 155 aaPredicted RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 OR5P3Q8WZ94 311 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 MRPS24Q96EL2 167 aaKnown RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 C1QTNF6Q9BXI9 259 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 MYOZ1Q9NP98 299 aaPredicted RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 ZNF71Q9NQZ8 489 aaPredicted RBP14.56□□□□□ -0.08
DDX41-201ENST00000330503 CA10Q9NS85 328 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 HSF4Q9ULV5 492 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 PROCRQ9UNN8 238 aa14.56□□□□□ -0.08
DDX41-201ENST00000330503 CHATP28329 748 aa14.55□□□□□ -0.08
DDX41-201ENST00000330503 PER3P56645 1201 aa14.55□□□□□ -0.08
DDX41-201ENST00000330503 PPA1Q15181 289 aa14.55□□□□□ -0.08
DDX41-201ENST00000330503 C2orf68Q2NKX9 166 aa14.55□□□□□ -0.08
DDX41-201ENST00000330503 ZNF324BQ6AW86 544 aaPredicted RBP14.55□□□□□ -0.08
DDX41-201ENST00000330503 LAMTOR1Q6IAA8 161 aa14.55□□□□□ -0.08
DDX41-201ENST00000330503 OR5A2Q8NGI9 324 aa14.55□□□□□ -0.08
DDX41-201ENST00000330503 MAFIPQ8WZ33 124 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms