RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 ACKR3P25106 362 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 CD80P33681 288 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 CTF1Q16619 201 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 TMEM52Q8NDY8 209 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 OR4F5Q8NH21 305 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 CLDN23Q96B33 292 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 ACY3Q96HD9 319 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 OR4F4Q96R69 305 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 CXorf51AA0A1B0GTR3 108 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 CCL3P10147 92 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 AVPR2P30518 371 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 RHBDD2Q6NTF9 364 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 MOB1BQ7L9L4 216 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 ZDHHC16Q969W1 377 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 GALR2O43603 387 aaPredicted RBP9.06□□□□□ -0.96
CHD3-201ENST00000330494 PSMB6P28072 239 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 FCER1GP30273 86 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 RAB35Q15286 201 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 MRGPREQ86SM8 312 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 OR10AD1Q8NGE0 317 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 PRDM6Q9NQX0 595 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 GAR1Q9NY12 217 aaKnown RBP9.06□□□□□ -0.96
CHD3-201ENST00000330494 TAAR3PQ9P1P4 343 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 CELA2AP08217 269 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 TMIGD3P0DMS9 266 aaPredicted RBP9.06□□□□□ -0.96
CHD3-201ENST00000330494 RPL12P30050 165 aaKnown RBP9.06□□□□□ -0.96
CHD3-201ENST00000330494 ETV6P41212 452 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 UBE2G2P60604 165 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 ERHP84090 104 aaKnown RBP9.06□□□□□ -0.96
CHD3-201ENST00000330494 STUMQ69YW2 141 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 OR2A2Q6IF42 318 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 SLC22A18ASQ8N1D0 253 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 ZNF561Q8N587 486 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 OR6S1Q8NH40 331 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 COMMD5Q9GZQ3 224 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 SLC25A32Q9H2D1 315 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 TRGV10A0A0A0MS01 117 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 UBE2L5PA0A1B0GUS4 154 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 CST7O76096 145 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 OPN1MWP04001 364 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 OPN1MW2P0DN77 364 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 OPN1MW3P0DN78 364 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 PNLIPP16233 465 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 RNPS1Q15287 305 aaKnown RBP9.06□□□□□ -0.96
CHD3-201ENST00000330494 OR10P1Q8NGE3 313 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 ABHD3Q8WU67 409 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 WDR34Q96EX3 536 aa9.06□□□□□ -0.96
CHD3-201ENST00000330494 WDR89Q96FK6 387 aaPredicted RBP9.06□□□□□ -0.96
CHD3-201ENST00000330494 MED19A0JLT2 244 aaPredicted RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 GIPP09681 153 aaPredicted RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 CRYBB2P43320 205 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 LSM11P83369 360 aaKnown RBP eCLIP9.05□□□□□ -0.96
CHD3-201ENST00000330494 ZNF680Q8NEM1 530 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 UCN2Q96RP3 112 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 RYDENQ9NUL5 291 aaKnown RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 FGF7P21781 194 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 HNRNPA3P51991 378 aaKnown RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 PPP1CBP62140 327 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 TPBGQ13641 420 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 COL13A1Q5TAT6 717 aaPredicted RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 LRRTM1Q86UE6 522 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 TUSC5Q8IXB3 177 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 PPP1R1CQ8WVI7 109 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 DTX4Q9Y2E6 619 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 DNAJC13O75165 2243 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 CHD5Q8TDI0 1954 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 TRAV1-2A0A0B4J238 106 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 M0R1X1 148 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 S100A7P31151 101 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 SELENOPP49908 381 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 CLDN20P56880 219 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 RPS4XP62701 263 aaKnown RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 COL19A1Q14993 1142 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 LRRC10Q5BKY1 277 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 GVQW1Q8N7I0 195 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 ANGPTL6Q8NI99 470 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 RTN4IP1Q8WWV3 396 aaPredicted RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 RPUSD4Q96CM3 377 aaKnown RBP9.05□□□□□ -0.96
CHD3-201ENST00000330494 POM121Q96HA1 1249 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 PTPRFP10586 1907 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 SEC14L6B5MCN3 397 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 NDUFB3O43676 98 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 MT-ND4LP03901 98 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 FABP4P15090 132 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 COX7A1P24310 79 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 FUT7Q11130 342 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 PRSS42Q7Z5A4 293 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 OR10AC1Q8NH08 325 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 PRR13Q9NZ81 148 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 FOXJ3Q9UPW0 622 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 ADRA2CP18825 462 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 PSG6Q00889 435 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 SLC16A13Q7RTY0 426 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 LYG2Q86SG7 212 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 APH1BQ8WW43 257 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 ASB10Q8WXI3 467 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 SRRQ9GZT4 340 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 CNTD2Q9H8S5 307 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 F6UZH7 168 aa9.05□□□□□ -0.96
CHD3-201ENST00000330494 SLC17A2O00624 439 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms