RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 PCBD1P61457 104 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 SPRED2Q7Z698 418 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 PPP1R3BQ86XI6 285 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 ADAT3Q96EY9 351 aaPredicted RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 OR51I2Q9H344 312 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 RBFOX3A6NFN3 312 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 GEMIN2O14893 280 aaKnown RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 NOVA1P51513 510 aaKnown RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 PNLIPRP2P54317 469 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 NKAIN1Q4KMZ8 207 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 RTL10Q7L3V2 364 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 FGF14Q92915 247 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 ESRP2Q9H6T0 727 aaKnown RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 C8orf33Q9H7E9 229 aaPredicted RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 CALHM2Q9HA72 323 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 HEYLQ9NQ87 328 aaPredicted RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 HSF4Q9ULV5 492 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 FRG2CA6NGY1 282 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 H0Y8G0 127 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 CYR61O00622 381 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 ZNF217O75362 1048 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 MPGP29372 298 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 MYBPHQ13203 477 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 SHBQ15464 509 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 MRGPREQ86SM8 312 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 YRDCQ86U90 279 aaKnown RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 PLEKHF2Q9H8W4 249 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 ICAM5Q9UMF0 924 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 UPK3AO75631 287 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 MT-CO2P00403 227 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 CD200P41217 278 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 LPAR6P43657 344 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 TMEM267Q0VDI3 215 aaPredicted RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 PMS2P11Q13670 270 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 FAHD2BQ6P2I3 314 aaPredicted RBP12.48□□□□□ -0.41
EPHB3-201ENST00000330394 ETV3LQ6ZN32 361 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 LYZL2Q7Z4W2 148 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 POC1BQ8TC44 478 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 ZNRF4Q8WWF5 429 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 FAHD2AQ96GK7 314 aa12.48□□□□□ -0.41
EPHB3-201ENST00000330394 A0A1W2PNV4 684 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 MASP2O00187 686 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 CT45A8P0DMV1 189 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 CT45A9P0DMV2 189 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 CT45A2Q5DJT8 189 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 ALKBH3Q96Q83 286 aaPredicted RBP12.47□□□□□ -0.41
EPHB3-201ENST00000330394 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 H0YIG0 161 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 ADAM20O43506 726 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 ZIC2O95409 532 aaPredicted RBP12.47□□□□□ -0.41
EPHB3-201ENST00000330394 ACTL6AO96019 429 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 IL9P15248 144 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 B4GALT1P15291 398 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 KIR2DS4P43632 304 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 ENDOGQ14249 297 aaKnown RBP12.47□□□□□ -0.41
EPHB3-201ENST00000330394 KIR2DS1Q14954 304 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 ST8SIA1Q92185 356 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 UCK1Q9HA47 277 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 B4GALT7Q9UBV7 327 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 TBX21Q9UL17 535 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 BRWD3Q6RI45 1802 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 CXorf51AA0A1B0GTR3 108 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 CACNA1GO43497 2377 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 ERVS71-1P61550 626 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 DLK1P80370 383 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 MRPS21P82921 87 aaKnown RBP12.47□□□□□ -0.41
EPHB3-201ENST00000330394 PABPC1L2AQ5JQF8 200 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 RPS4Y2Q8TD47 263 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 RNF150Q9ULK6 438 aa12.47□□□□□ -0.41
EPHB3-201ENST00000330394 A0A096LPE4 126 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 A0A1W2PPC1 479 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 A0A1W2PPZ6 126 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 XKRY2A2RUG3 117 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 ARGFXA6NJG6 315 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 H3BQ15 152 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 PATE4P0C8F1 98 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 ZBTB25P24278 435 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 ZNF90Q03938 601 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 MPV17LQ2QL34 196 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 ZNF880Q6PDB4 577 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 ZNF574Q6ZN55 896 aaPredicted RBP12.46□□□□□ -0.41
EPHB3-201ENST00000330394 PACRGQ96M98 296 aaPredicted RBP12.46□□□□□ -0.41
EPHB3-201ENST00000330394 HDHD3Q9BSH5 251 aaPredicted RBP12.46□□□□□ -0.41
EPHB3-201ENST00000330394 MSL2Q9HCI7 577 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 OBP2BQ9NPH6 170 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 GNG12Q9UBI6 72 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 RPH3ALQ9UNE2 315 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 ZDBF2Q9HCK1 2354 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 PLPP3O14495 311 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 CAPZBP47756 277 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 NHLH2Q02577 135 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 TRIM61Q5EBN2 209 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 TMEM164Q5U3C3 297 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 TOMM20LQ6UXN7 152 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 IP6K3Q96PC2 410 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 UHRF2Q96PU4 802 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 PSENENQ9NZ42 101 aa12.46□□□□□ -0.41
EPHB3-201ENST00000330394 CNOT1A5YKK6 2376 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms