RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CDK2P24941 298 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 FUT6P51993 359 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 ZNF92Q03936 586 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 DYRK1AQ13627 763 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 ARL6IP1Q15041 203 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 KISS1Q15726 138 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 DNM1P46Q6ZS02 220 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 MRPL21Q7Z2W9 205 aaKnown RBP14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 ANGPTL5Q86XS5 388 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 ZNF584Q8IVC4 421 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 FBXW5Q969U6 566 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 GPER1Q99527 375 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 S100A13Q99584 98 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 CDH20Q9HBT6 801 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 FAIMQ9NVQ4 179 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 TAS2R8Q9NYW2 309 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 CGGBP1Q9UFW8 167 aaPredicted RBP14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 OVOL3O00110 214 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 GMDSO60547 372 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 NDUFS7O75251 213 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 ZNF780AO75290 641 aaPredicted RBP14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 CST4P01036 141 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 SELEP16581 610 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 PTH2RP49190 550 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 IDH3GP51553 393 aaPredicted RBP14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 UBE2V2Q15819 145 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 AWAT2Q6E213 333 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 SNX29P2Q8IUI4 249 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 OR4D6Q8NGJ1 314 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 FAM46BQ96A09 425 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 PPP1R14BQ96C90 147 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 PERPQ96FX8 193 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 RADILQ96JH8 1075 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 SOX7Q9BT81 388 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 URM1Q9BTM9 101 aaKnown RBP14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 SCPEP1Q9HB40 452 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 BEX4Q9NWD9 120 aaPredicted RBP14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 TBC1D24Q9ULP9 559 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 MRPS28Q9Y2Q9 187 aaKnown RBP14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 MRPS7Q9Y2R9 242 aaKnown RBP14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 NOP16Q9Y3C1 178 aaKnown RBP14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 IGKV1-9A0A0C4DH69 117 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 TMEM14DPA8MWL7 114 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 NAT2P11245 290 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 CCNOP22674 350 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 CDKN1AP38936 164 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 PTGFRP43088 359 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 RBP2P50120 134 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 ATP1B3P54709 279 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 TAS2R20P59543 309 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 QRFPP83859 136 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 NAAAQ02083 359 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 OR2AE1Q8NHA4 323 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 TRIM63Q969Q1 353 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 ATG5Q9H1Y0 275 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 OCEL1Q9H607 264 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 RBFOX1Q9NWB1 397 aaKnown RBP14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 ZNF107Q9UII5 783 aaPredicted RBP14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 EDARQ9UNE0 448 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 MPC1Q9Y5U8 109 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 ATP23Q9Y6H3 246 aa14.05□□□□□ -0.16
PDLIM1-201ENST00000329399 ARFGEF3Q5TH69 2177 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 C5orf63A6NC05 138 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 NAP1L6A6NFF2 107 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 SMPD2O60906 423 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 ACKR3P25106 362 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 NKX6-1P78426 367 aaPredicted RBP14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 GK2Q14410 553 aaPredicted RBP14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 MST1LQ2TV78 715 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 ZNF57Q68EA5 555 aaPredicted RBP14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 GLIPR1L1Q6UWM5 242 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 FBXW12Q6X9E4 464 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 ZNF101Q8IZC7 436 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 TOMM5Q8N4H5 51 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 ZSCAN4Q8NAM6 433 aaPredicted RBP14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 YIPF5Q969M3 257 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 BORCS8Q96FH0 119 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 TRAF4Q9BUZ4 470 aaPredicted RBP14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 ZNF701Q9NV72 531 aaPredicted RBP14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 COPZ2Q9P299 210 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 POU2F3Q9UKI9 436 aa14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 RBMX2Q9Y388 322 aaKnown RBP14.04□□□□□ -0.16
PDLIM1-201ENST00000329399 NF1P21359 2839 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 IGHV2OR16-5A0A0B4J2B6 119 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 A6NIN4 97 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 LYRM1O43325 122 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 RAD52P43351 418 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 MSMPQ1L6U9 139 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 C11orf71Q6IPW1 123 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 GDPD3Q7L5L3 318 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 DTX2Q86UW9 622 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 DUSP18Q8NEJ0 188 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 UBASH3BQ8TF42 649 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 MRPS24Q96EL2 167 aaKnown RBP14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 DHRS9Q9BPW9 319 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 STARD10Q9Y365 291 aa14.03□□□□□ -0.16
PDLIM1-201ENST00000329399 PLA2G10O15496 165 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 RBBP9O75884 186 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 VSIG8P0DPA2 414 aa14.02□□□□□ -0.16
PDLIM1-201ENST00000329399 RAC2P15153 192 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms