RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 A0A1W2PRD5 423 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 A0A1W2PRF3 423 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 A0A1W2PRM7 423 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 NKX6-3A6NJ46 265 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 ANXA2P2A6NMY6 339 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 M0R129 80 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 PAHP00439 452 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 OPN1MWP04001 364 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 ACAA1P09110 424 aaPredicted RBP11.6□□□□□ -0.55
RPP40-201ENST00000319533 OPN1MW2P0DN77 364 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 OPN1MW3P0DN78 364 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 GABRA5P31644 462 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 AANATQ16613 207 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 SAMD5Q5TGI4 173 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 ZBTB49Q6ZSB9 765 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 PPP1R35Q8TAP8 253 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 H1FXQ92522 213 aaKnown RBP11.6□□□□□ -0.55
RPP40-201ENST00000319533 RPL3LQ92901 407 aaKnown RBP11.6□□□□□ -0.55
RPP40-201ENST00000319533 IL4I1Q96RQ9 567 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 MNTQ99583 582 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 MEGF9Q9H1U4 602 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 PPA2Q9H2U2 334 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 DNAJB11Q9UBS4 358 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 SLC25A10Q9UBX3 287 aaPredicted RBP11.6□□□□□ -0.55
RPP40-201ENST00000319533 ZNF391Q9UJN7 358 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 LRP12Q9Y561 859 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 MAB21L2Q9Y586 359 aa11.6□□□□□ -0.55
RPP40-201ENST00000319533 ANKRD61A6NGH8 418 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 G3V4G9 280 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 ZNF254O75437 659 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 ALPLP05186 524 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 ACKR3P25106 362 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 HCCSP53701 268 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 CDC42P60953 191 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 PRDX4Q13162 271 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 AADACL4Q5VUY2 407 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 DEGS2Q6QHC5 323 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 Q6ZTK2 550 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 BCDIN3DQ7Z5W3 292 aaKnown RBP11.59□□□□□ -0.55
RPP40-201ENST00000319533 HPSE2Q8WWQ2 592 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 RANBP3Q9H6Z4 567 aaPredicted RBP11.59□□□□□ -0.55
RPP40-201ENST00000319533 SNTG1Q9NSN8 517 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 USE1Q9NZ43 259 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 IKZF2Q9UKS7 526 aa11.59□□□□□ -0.55
RPP40-201ENST00000319533 SF3B6Q9Y3B4 125 aaKnown RBP11.59□□□□□ -0.55
RPP40-201ENST00000319533 TRBV23-1A0A0A0MS06 115 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 MEGF11A6BM72 1044 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 ACOD1A6NK06 481 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 ZNF850A8MQ14 1090 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 H3BUX3 64 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 PLXNB1O43157 2135 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 ALDH3A2P51648 485 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 RIDAP52758 137 aaKnown RBP11.58□□□□□ -0.56
RPP40-201ENST00000319533 EFNB1P98172 346 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 ROM1Q03395 351 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 BLMHQ13867 455 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 ZNF829Q3KNS6 432 aaPredicted RBP11.58□□□□□ -0.56
RPP40-201ENST00000319533 SLC35F2Q8IXU6 374 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 ZNF679Q8IYX0 411 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 PACRGLQ8N7B6 248 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 OR5D13Q8NGL4 314 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 OR8J1Q8NGP2 316 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 C17orf50Q8WW18 174 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 RFKQ969G6 155 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 LYZL4Q96KX0 146 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 OR8B4Q96RC9 309 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 MBOAT4Q96T53 435 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 SSX3Q99909 188 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 FAM234AQ9H0X4 552 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 ADGRL4Q9HBW9 690 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 IMPAD1Q9NX62 359 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 NLKQ9UBE8 527 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 WARS2Q9UGM6 360 aaKnown RBP11.58□□□□□ -0.56
RPP40-201ENST00000319533 ZNF222Q9UK12 451 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 SIGLEC9Q9Y336 463 aa11.58□□□□□ -0.56
RPP40-201ENST00000319533 IGKV1D-17A0A075B6S4 117 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 TMEM269A0A1B0GVZ9 245 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 OR2AT4A6NND4 320 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 ZNF670-ZNF695F2Z2N8 137 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 PSMD9O00233 223 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 AKR7A2O43488 359 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 TFF1P04155 84 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 NDUFB7P17568 137 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 HTR1FP30939 366 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 ATP6V1E1P36543 226 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 POLR2IP36954 125 aaKnown RBP11.57□□□□□ -0.56
RPP40-201ENST00000319533 GMFBP60983 142 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 ZNF322Q6U7Q0 402 aaPredicted RBP11.57□□□□□ -0.56
RPP40-201ENST00000319533 COMMD2Q86X83 199 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 OR8B12Q8NGG6 310 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 OR51G2Q8NGK0 314 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 FAM81AQ8TBF8 368 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 ITFG2Q969R8 447 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 SDSLQ96GA7 329 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 RNF170Q96K19 258 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 VCX3BQ9H321 246 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 OR51I2Q9H344 312 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 CLN6Q9NWW5 311 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 COPS3Q9UNS2 423 aa11.57□□□□□ -0.56
RPP40-201ENST00000319533 A0A1W2PQ09 198 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms