RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MARCH1Q8TCQ1 289 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 CASTOR1Q8WTX7 329 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 CHST5Q9GZS9 411 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 ZDHHC11Q9H8X9 412 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 ATMQ13315 3056 aa12.36□□□□□ -0.43
VRK3-201ENST00000316763 TRAV17A0A0B4J275 112 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 E9PLN8 166 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 CCSO14618 274 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 SMAD9O15198 467 aaKnown RBP12.35□□□□□ -0.43
VRK3-201ENST00000316763 NAT2P11245 290 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 FAHP16930 419 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 ANOS1P23352 680 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 OR3A2P47893 321 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 TAS2R46P59540 309 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 SLC10A1Q14973 349 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 PPA1Q15181 289 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 RAB35Q15286 201 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 TMEM128Q5BJH2 165 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 RNFT1Q5M7Z0 435 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 DRAM2Q6UX65 266 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 KCTD9Q7L273 389 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 ZADH2Q8N4Q0 377 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 ADAD2Q8NCV1 583 aaKnown RBP12.35□□□□□ -0.43
VRK3-201ENST00000316763 OR5M9Q8NGP3 310 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 OR10D3Q8NH80 312 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 NPRL2Q8WTW4 380 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 PPP1R1CQ8WVI7 109 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 CPNE2Q96FN4 548 aaPredicted RBP12.35□□□□□ -0.43
VRK3-201ENST00000316763 SEC22AQ96IW7 307 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 DHRS9Q9BPW9 319 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 SLC6A15Q9H2J7 730 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 TNFSF18Q9UNG2 199 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 TP53TG5Q9Y2B4 290 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 PKD1L2Q7Z442 2459 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 A0A1W2PP11 408 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 MFSD2BA6NFX1 497 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 SGCEO43556 437 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 SPDEFO95238 335 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 CST2P09228 141 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 ZNF708P17019 499 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 BLVRBP30043 206 aaPredicted RBP12.35□□□□□ -0.43
VRK3-201ENST00000316763 CLDN18P56856 261 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 CYCSP99999 105 aaKnown RBP12.35□□□□□ -0.43
VRK3-201ENST00000316763 UBE2V2Q15819 145 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 RSPO1Q2MKA7 263 aaPredicted RBP12.35□□□□□ -0.43
VRK3-201ENST00000316763 ACOT7LQ6ZUV0 252 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 TMEM185AQ8NFB2 350 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 REG4Q9BYZ8 158 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 SLC25A32Q9H2D1 315 aa12.35□□□□□ -0.43
VRK3-201ENST00000316763 C5orf63A6NC05 138 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 C5orf51A6NDU8 294 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 ZSCAN5BA6NJL1 495 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 DHRS7CA6NNS2 312 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 CEACAM18A8MTB9 384 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 SERPINE3A8MV23 424 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 RAD51DO75771 328 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 CPT2P23786 658 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 BAMBIQ13145 260 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 LRRC37A5PQ49AS3 106 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 FAM209AQ5JX71 171 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 SLC16A14Q7RTX9 510 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 RTN4RL2Q86UN3 420 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 GPR137CQ8N3F9 429 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 INO80EQ8NBZ0 244 aaPredicted RBP12.34□□□□□ -0.43
VRK3-201ENST00000316763 SEMA6DQ8NFY4 1073 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 OR5D18Q8NGL1 313 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 CPT1CQ8TCG5 803 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 ST8SIA2Q92186 375 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 CXorf58Q96LI9 332 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 VRK1Q99986 396 aaPredicted RBP12.34□□□□□ -0.43
VRK3-201ENST00000316763 TM2D1Q9BX74 207 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 NARFLQ9H6Q4 476 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 ELL3Q9HB65 397 aaPredicted RBP12.34□□□□□ -0.43
VRK3-201ENST00000316763 ZNF71Q9NQZ8 489 aaPredicted RBP12.34□□□□□ -0.43
VRK3-201ENST00000316763 GPR132Q9UNW8 380 aa12.34□□□□□ -0.43
VRK3-201ENST00000316763 USP24Q9UPU5 2620 aa12.33□□□□□ -0.43
VRK3-201ENST00000316763 BCL2L11O43521 198 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 CXCL13O43927 109 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 CA11O75493 328 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 ACTL6AO96019 429 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 SERPINA2P20848 420 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 ZP3P21754 424 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 FPR2P25090 351 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 ATP1B3P54709 279 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 SCRN3Q0VDG4 424 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 PDSS1Q5T2R2 415 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 AAED1Q7RTV5 226 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 RBMXL3Q8N7X1 1067 aaKnown RBP12.33□□□□□ -0.44
VRK3-201ENST00000316763 CSNK2A3Q8NEV1 391 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 CPNE4Q96A23 557 aaPredicted RBP12.33□□□□□ -0.44
VRK3-201ENST00000316763 ST6GALNAC5Q9BVH7 336 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 PECRQ9BY49 303 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 TUBD1Q9UJT1 453 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 PIEZO2Q9H5I5 2752 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 A0A0B4J2A0 478 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 POM121CA8CG34 1229 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 B8ZZF3 427 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 EEF1E1-BLOC1S5C9J1V9 151 aa12.33□□□□□ -0.44
VRK3-201ENST00000316763 DBHP09172 617 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms