RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 C20orf24Q9BUV8 137 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 SMIM3Q9BZL3 60 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 ELL3Q9HB65 397 aaPredicted RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF275Q9NSD4 429 aaPredicted RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 GSKIPQ9P0R6 139 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 BOKQ9UMX3 212 aaPredicted RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF716A6NP11 495 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 SLC17A2O00624 439 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 FBXO24O75426 580 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 HLA-HP01893 362 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 SP1P08047 785 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 GLI4P10075 376 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 MSR1P21757 451 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 IGFBP7Q16270 282 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 HIST3H3Q16695 136 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 PCK2Q16822 640 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 RNASE10Q5GAN6 216 aaKnown RBP6.64□□□□□ -1.35
TRIM55-202ENST00000315962 PIP4P1Q86T03 277 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 TMEM17Q86X19 198 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 ANGPTL5Q86XS5 388 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF101Q8IZC7 436 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 GPR137CQ8N3F9 429 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 PGAM5Q96HS1 289 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 FAM173AQ9BQD7 235 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 NELFAQ9H3P2 528 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 FN3KRPQ9HA64 309 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 SLC7A10Q9NS82 523 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 PURGQ9UJV8 347 aaKnown RBP6.64□□□□□ -1.35
TRIM55-202ENST00000315962 TLN1Q9Y490 2541 aaKnown RBP6.64□□□□□ -1.35
TRIM55-202ENST00000315962 TMEM218A2RU14 115 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 OR14I1A6ND48 311 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 SDCBPO00560 298 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-202ENST00000315962 MRPL33O75394 65 aaKnown RBP6.64□□□□□ -1.35
TRIM55-202ENST00000315962 SERPINA5P05154 406 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 CYC1P08574 325 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 HCKP08631 526 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 DAOP14920 347 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF32P17041 273 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 NME2P22392 152 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 OR3A4PP47883 348 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 S100A10P60903 97 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 PDCD1Q15116 288 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF239Q16600 458 aaKnown RBP6.64□□□□□ -1.35
TRIM55-202ENST00000315962 PABPC1L2AQ5JQF8 200 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 MOB3CQ70IA8 216 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 C1QL2Q7Z5L3 287 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 KCNRGQ8N5I3 272 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 INO80EQ8NBZ0 244 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-202ENST00000315962 TMEM104Q8NE00 496 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 OR6S1Q8NH40 331 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 NANPQ8TBE9 248 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 PIGTQ969N2 578 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 NABP1Q96AH0 204 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 LYZL4Q96KX0 146 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 GPER1Q99527 375 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 DNTTIP1Q9H147 329 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 SLC25A32Q9H2D1 315 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF552Q9H707 407 aaPredicted RBP6.64□□□□□ -1.35
TRIM55-202ENST00000315962 PCNX1Q96RV3 2341 aa6.64□□□□□ -1.35
TRIM55-202ENST00000315962 A0A1B0GTI1 187 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 GJE1A6NN92 205 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 CRYBA1P05813 215 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 S100A6P06703 90 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF20P17024 532 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 CALCRP30988 508 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 LHX2P50458 406 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 MECP2P51608 486 aaKnown RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ACTBP60709 375 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ACTG1P63261 375 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 SCRN3Q0VDG4 424 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 TSC22D1Q15714 1073 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 PAN3Q58A45 887 aaKnown RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 BRICD5Q6PL45 260 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 SKA3Q8IX90 412 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ARL6IP6Q8N6S5 226 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 OR4A4PQ8NGN8 299 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 CCDC107Q8WV48 283 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 CMTM3Q96MX0 182 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 MED9Q9NWA0 146 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 TAS2R8Q9NYW2 309 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 OR5AC2Q9NZP5 309 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ABI3Q9P2A4 366 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 PCDHGA1Q9Y5H4 931 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 DIDO1Q9BTC0 2240 aaKnown RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 COL27A1Q8IZC6 1860 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ICE1Q9Y2F5 2266 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 TRBV23-1A0A0A0MS06 115 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 C9orf170A2RU37 121 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF503-AS2A6NEH8 195 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 H0YIZ8 118 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 LCATP04180 440 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 NKAPLQ5M9Q1 402 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 AWAT2Q6E213 333 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF813Q6ZN06 617 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF704Q6ZNC4 412 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 PNLDC1Q8NA58 520 aaKnown RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 ZSCAN4Q8NAM6 433 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-202ENST00000315962 SEMA6DQ8NFY4 1073 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 OR5D14Q8NGL3 314 aa6.63□□□□□ -1.35
TRIM55-202ENST00000315962 RXFP4Q8TDU9 374 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms