RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 LIME1Q9H400 295 aa11.09□□□□□ -0.63
TNIP1-201ENST00000315050 BIN3Q9NQY0 253 aa11.09□□□□□ -0.63
TNIP1-201ENST00000315050 PADI1Q9ULC6 663 aa11.09□□□□□ -0.63
TNIP1-201ENST00000315050 IGLV3-32A0A0A0MS00 114 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 ZNF850A8MQ14 1090 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 TAAR5O14804 337 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 CST4P01036 141 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 IFNA21P01568 189 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 OR5H8P0DN80 308 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 SLC25A43Q8WUT9 341 aaPredicted RBP11.08□□□□□ -0.64
TNIP1-201ENST00000315050 SECTM1Q8WVN6 248 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 ERGIC1Q969X5 290 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 PRRX2Q99811 253 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 ZNF576Q9H609 170 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.08□□□□□ -0.64
TNIP1-201ENST00000315050 EML6Q6ZMW3 1958 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 NPIPA2E9PIF3 369 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 NPIPA3F8WFD2 350 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 XRCC2O43543 280 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 DEDDO75618 318 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 DIRAS3O95661 229 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 FCGR3AP08637 254 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 F2RL1P55085 397 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 PIGPP57054 158 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 LSM6P62312 80 aaKnown RBP11.08□□□□□ -0.64
TNIP1-201ENST00000315050 SURF2Q15527 256 aaPredicted RBP11.08□□□□□ -0.64
TNIP1-201ENST00000315050 CDCP2Q5VXM1 449 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 TMEM268Q5VZI3 342 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 RPUSD3Q6P087 351 aaKnown RBP11.08□□□□□ -0.64
TNIP1-201ENST00000315050 PP6455Q8WZ26 134 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 KIRREL1Q96J84 757 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 ANXA10Q9UJ72 324 aa11.08□□□□□ -0.64
TNIP1-201ENST00000315050 CHCHD2Q9Y6H1 151 aaPredicted RBP11.08□□□□□ -0.64
TNIP1-201ENST00000315050 MSTNO14793 375 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 ACKR3P25106 362 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 EIF1P41567 113 aaKnown RBP11.07□□□□□ -0.64
TNIP1-201ENST00000315050 ALDH3B1P43353 468 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 ZNF616Q08AN1 781 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 BTNL8Q6UX41 500 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 BSCL2Q96G97 398 aaPredicted RBP11.07□□□□□ -0.64
TNIP1-201ENST00000315050 TM2D1Q9BX74 207 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 NXT1Q9UKK6 140 aaKnown RBP11.07□□□□□ -0.64
TNIP1-201ENST00000315050 MTCH2Q9Y6C9 303 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 V9GYS6 101 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 A0A0U1RQV5 110 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 A0A1W2PQM1 296 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 MED19A0JLT2 244 aaPredicted RBP11.07□□□□□ -0.64
TNIP1-201ENST00000315050 NME2P1O60361 137 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 JTBO76095 146 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 IGLV3-1P01715 115 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 FHITP49789 147 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 PDCD1Q15116 288 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 PHLDA2Q53GA4 152 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 SLC16A14Q7RTX9 510 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 NABP1Q96AH0 204 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 C14orf79Q96F83 325 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 REEP6Q96HR9 211 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 AMDHD2Q9Y303 409 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 B3GALT1Q9Y5Z6 326 aa11.07□□□□□ -0.64
TNIP1-201ENST00000315050 A0A1B0GV50 99 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 CRYM-AS1A6NIL9 109 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 LINC01387J3KSC0 135 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 DHHO43323 396 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 CD5P06127 495 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 OR5AC1P0C628 307 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 CTSSP25774 331 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 CCL7P80098 99 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 RSU1Q15404 277 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 FADS6Q8N9I5 356 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 OR9K2Q8NGE7 335 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 FBXO17Q96EF6 278 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 Q96M66 194 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 ULBP2Q9BZM5 246 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 FSCN3Q9NQT6 498 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 AK3Q9UIJ7 227 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 CCDC85CA6NKD9 419 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 CTSDP07339 412 aaPredicted RBP11.06□□□□□ -0.64
TNIP1-201ENST00000315050 TGIF1Q15583 401 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 ABCA11PQ4W5N1 156 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 BATF2Q8N1L9 274 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 SGK3Q96BR1 496 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 CLCC1Q96S66 551 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 C20orf24Q9BUV8 137 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 RPS10P5Q9NQ39 176 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 PARP11Q9NR21 331 aa11.06□□□□□ -0.64
TNIP1-201ENST00000315050 COLCA2A8K830 154 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 TP53I11O14683 189 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 C1QL1O75973 258 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 TSPAN15O95858 294 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 MBPP02686 304 aaPredicted RBP11.05□□□□□ -0.64
TNIP1-201ENST00000315050 CD63P08962 238 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 PATE4P0C8F1 98 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 ZNF84P51523 738 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 DVL1P1P54792 670 aaPredicted RBP11.05□□□□□ -0.64
TNIP1-201ENST00000315050 H3F3AP84243 136 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 ARL6IP1Q15041 203 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 SHBQ15464 509 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 MIDNQ504T8 468 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 LYZL2Q7Z4W2 148 aa11.05□□□□□ -0.64
TNIP1-201ENST00000315050 PPP1R3BQ86XI6 285 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms